Information for 4-YDGAGGCAGCKGCWRD (Motif 5)

G A T C C A G T A C T G C T G A A C T G A C T G A T G C C G T A C T A G A G T C C A G T C T A G G T A C C G T A T C A G C A T G
Reverse Opposite:
G A T C A G T C C G A T A C T G G A T C G T C A C T A G A G T C C G A T A T C G G T A C A G T C A G C T G T A C G T C A C T A G
p-value:1e-11
log p-value:-2.756e+01
Information Content per bp:1.649
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.45%
Number of Background Sequences with motif109.0
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets58.2 +/- 26.5bp
Average Position of motif in Background52.7 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:YDGAGGCAGCKGCWRD
-TGAGTCAGCA-----
 G A T C C A G T A C T G C T G A A C T G A C T G A T G C C G T A C T A G A G T C C A G T C T A G G T A C C G T A T C A G C A T G
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YDGAGGCAGCKGCWRD
-NGNGACAGCTGCN--
 G A T C C A G T A C T G C T G A A C T G A C T G A T G C C G T A C T A G A G T C C A G T C T A G G T A C C G T A T C A G C A T G
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:YDGAGGCAGCKGCWRD
-AGAGGAAGTG-----
 G A T C C A G T A C T G C T G A A C T G A C T G A T G C C G T A C T A G A G T C C A G T C T A G G T A C C G T A T C A G C A T G
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:YDGAGGCAGCKGCWRD
----GACAGCTGCAG-
 G A T C C A G T A C T G C T G A A C T G A C T G A T G C C G T A C T A G A G T C C A G T C T A G G T A C C G T A T C A G C A T G
A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:YDGAGGCAGCKGCWRD
----AGCAGCTGCT--
 G A T C C A G T A C T G C T G A A C T G A C T G A T G C C G T A C T A G A G T C C A G T C T A G G T A C C G T A T C A G C A T G
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:YDGAGGCAGCKGCWRD
----AGCAGCTGCTNN
 G A T C C A G T A C T G C T G A A C T G A C T G A T G C C G T A C T A G A G T C C A G T C T A G G T A C C G T A T C A G C A T G
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YDGAGGCAGCKGCWRD-
NNNNAGCAGCTGCTGAN
 G A T C C A G T A C T G C T G A A C T G A C T G A T G C C G T A C T A G A G T C C A G T C T A G G T A C C G T A T C A G C A T G A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:YDGAGGCAGCKGCWRD
---TGGCAGTTGN---
 G A T C C A G T A C T G C T G A A C T G A C T G A T G C C G T A C T A G A G T C C A G T C T A G G T A C C G T A T C A G C A T G
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:YDGAGGCAGCKGCWRD
----AACAGCTGCAG-
 G A T C C A G T A C T G C T G A A C T G A C T G A T G C C G T A C T A G A G T C C A G T C T A G G T A C C G T A T C A G C A T G
A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--YDGAGGCAGCKGCWRD
TGCTGASTCAGC------
 A C G T A C G T G A T C C A G T A C T G C T G A A C T G A C T G A T G C C G T A C T A G A G T C C A G T C T A G G T A C C G T A T C A G C A T G
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T