Information for 15-TCATTTAAAT (Motif 45)

A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G C G T A
p-value:1e-1
log p-value:-3.663e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif17.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets8.3 +/- 2.6bp
Average Position of motif in Background46.9 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.79
Offset:2
Orientation:forward strand
Alignment:TCATTTAAAT-
--ATTTGAATT
 A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TCATTTAAAT-
NANTTCATTGAATTA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TCATTTAAAT-
CTCATTTGCATW
 A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCATTTAAAT
ANCGTTTANN-
 A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TCATTTAAAT-
NNCATTCATTCATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PH0095.1_Lhx5/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TCATTTAAAT---
CGAATTAATTAAATACT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCATTTAAAT-
--ATTTGCATA
 A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

POU1F1/MA0784.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCATTTAAAT---
CTAATTTGCATATT
 A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCATTTAAAT-
BTVATTWGCATA
 A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCATTTAAAT
NNCAATTANN-
 A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T