Information for 6-GCCACTCACT (Motif 40)

A C T G G T A C A G T C T C G A A G T C A C G T A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G C G T A A C T G A G C T A C T G A C T G A G T C
p-value:1e-3
log p-value:-9.003e+00
Information Content per bp:1.922
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif74.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets43.2 +/- 26.7bp
Average Position of motif in Background54.0 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GCCACTCACT
RGGGCACTAACY
 A C G T A C G T A C T G G T A C A G T C T C G A A G T C A C G T A G T C C G T A A G T C A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GCCACTCACT
SCTGTCAVTCAV-
 A C G T A C G T A C G T A C T G G T A C A G T C T C G A A G T C A C G T A G T C C G T A A G T C A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCCACTCACT
AGCCACTCAAG
 A C G T A C T G G T A C A G T C T C G A A G T C A C G T A G T C C G T A A G T C A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCCACTCACT
NCTGTCAATCAN-
 A C G T A C G T A C G T A C T G G T A C A G T C T C G A A G T C A C G T A G T C C G T A A G T C A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCACTCACT
AASCACTCAA-
 A C G T A C T G G T A C A G T C T C G A A G T C A C G T A G T C C G T A A G T C A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCACTCACT
MRSCACTYAA-
 A C G T A C T G G T A C A G T C T C G A A G T C A C G T A G T C C G T A A G T C A C G T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCACTCACT
GCCMCRCCCH
 A C T G G T A C A G T C T C G A A G T C A C G T A G T C C G T A A G T C A C G T
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCCACTCACT--------
--CAATCACTGGCAGAAT
 A C T G G T A C A G T C T C G A A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCCACTCACT
GSCTGTCACTCA--
 A C G T A C G T A C G T A C G T A C T G G T A C A G T C T C G A A G T C A C G T A G T C C G T A A G T C A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCACTCACT-
GGCCACRCCCMK
 A C G T A C T G G T A C A G T C T C G A A G T C A C G T A G T C C G T A A G T C A C G T A C G T
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G