Information for 18-GGCTTTTTGCCCC (Motif 35)

A C T G A C T G A G T C A C G T A C G T A C G T A G C T A C G T A C T G A G T C A T G C A T G C A T G C
Reverse Opposite:
A T C G A T C G A T C G C T A G A G T C C G T A C T G A C G T A C G T A C G T A A C T G A G T C G T A C
p-value:1e-7
log p-value:-1.738e+01
Information Content per bp:1.904
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.3 +/- 15.6bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCTTTTTGCCCC---
-WCATTTTGKCCTCYT
 A C T G A C T G A G T C A C G T A C G T A C G T A G C T A C G T A C T G A G T C A T G C A T G C A T G C A C G T A C G T A C G T
A C G T C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTTTTGCCCC
TTGGCATGGTGCCA-
 A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G C T A C G T A C T G A G T C A T G C A T G C A T G C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A A C G T

Rarg/MA0859.1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTTTTGCCCC-
TTGACCTTTTGACCTT
 A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G C T A C G T A C T G A G T C A T G C A T G C A T G C A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCTTTTTGCCCC
-YCTTTGTTCC--
 A C T G A C T G A G T C A C G T A C G T A C G T A G C T A C G T A C T G A G T C A T G C A T G C A T G C
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGCTTTTTGCCCC
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G C T A C G T A C T G A G T C A T G C A T G C A T G C
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCTTTTTGCCCC
CTGGCAGNCTGCCA-
 A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G C T A C G T A C T G A G T C A T G C A T G C A T G C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

Rarb/MA0857.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTTTTGCCCC--
TGACCTTTTGACCTTT
 A C G T A C T G A C T G A G T C A C G T A C G T A C G T A G C T A C G T A C T G A G T C A T G C A T G C A T G C A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGCTTTTTGCCCC
-CCWTTGTYYB--
 A C T G A C T G A G T C A C G T A C G T A C G T A G C T A C G T A C T G A G T C A T G C A T G C A T G C
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGCTTTTTGCCCC--
ANATTTTTGCAANTN
 A C T G A C T G A G T C A C G T A C G T A C G T A G C T A C G T A C T G A G T C A T G C A T G C A T G C A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGCTTTTTGCCCC--
---TTTTCGCGCGAA
 A C T G A C T G A G T C A C G T A C G T A C G T A G C T A C G T A C T G A G T C A T G C A T G C A T G C A C G T A C G T
A C G T A C G T A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A