Information for 3-GCCCAAGAGG (Motif 34)

A C T G A G T C A G T C A T G C C G T A G T C A A T C G C G T A A C T G C T A G
Reverse Opposite:
A G T C G T A C A C G T A T G C A C G T C G A T A T C G A C T G A C T G A G T C
p-value:1e-7
log p-value:-1.740e+01
Information Content per bp:1.860
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif77.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets44.1 +/- 25.3bp
Average Position of motif in Background51.9 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------GCCCAAGAGG
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A T G C C G T A G T C A A T C G C G T A A C T G C T A G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAAGAGG--
TGCCCTNAGGGCA
 A C G T A C T G A G T C A G T C A T G C C G T A G T C A A T C G C G T A A C T G C T A G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAAGAGG--
TGCCCTNAGGGCA
 A C G T A C T G A G T C A G T C A T G C C G T A G T C A A T C G C G T A A C T G C T A G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCCAAGAGG--
TGCCCTGAGGGCA
 A C G T A C T G A G T C A G T C A T G C C G T A G T C A A T C G C G T A A C T G C T A G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCCCAAGAGG-
GGGGCCCAAGGGGG
 A C G T A C G T A C G T A C T G A G T C A G T C A T G C C G T A G T C A A T C G C G T A A C T G C T A G A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------GCCCAAGAGG
AAGCATACGCCCAACTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A T G C C G T A G T C A A T C G C G T A A C T G C T A G
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCCAAGAGG
ATGCCCACC---
 A C G T A C G T A C T G A G T C A G T C A T G C C G T A G T C A A T C G C G T A A C T G C T A G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCCAAGAGG--
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C T G A G T C A G T C A T G C C G T A G T C A A T C G C G T A A C T G C T A G A C G T A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCCAAGAGG---
CCACACAGCAGGAGA
 A C G T A C G T A C T G A G T C A G T C A T G C C G T A G T C A A T C G C G T A A C T G C T A G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCCAAGAGG--
CCGCCCAAGGGCAG
 A C G T A C G T A C T G A G T C A G T C A T G C C G T A G T C A A T C G C G T A A C T G C T A G A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G