Information for 17-CAGCGTCGGGCAC (Motif 32)

A G T C C G T A A C T G A T G C A C T G A G C T A G T C A C T G A C T G A C T G A T G C C G T A A G T C
Reverse Opposite:
A C T G A C G T A T C G A G T C A G T C A G T C A C T G T C G A G T A C A T C G A G T C A C G T C T A G
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.864
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif24.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets43.0 +/- 29.8bp
Average Position of motif in Background49.6 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CAGCGTCGGGCAC
----NGTGGGCAT
 A G T C C G T A A C T G A T G C A C T G A G C T A G T C A C T G A C T G A C T G A T G C C G T A A G T C
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGCGTCGGGCAC----
-NNNNTTGGGCACNNCN
 A G T C C G T A A C T G A T G C A C T G A G C T A G T C A C T G A C T G A C T G A T G C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CAGCGTCGGGCAC
----TNNGGGCAG
 A G T C C G T A A C T G A T G C A C T G A G C T A G T C A C T G A C T G A C T G A T G C C G T A A G T C
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CAGCGTCGGGCAC
------TGGGGA-
 A G T C C G T A A C T G A T G C A C T G A G C T A G T C A C T G A C T G A C T G A T G C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGCGTCGGGCAC
-NGCCTGAGGCN-
 A G T C C G T A A C T G A T G C A C T G A G C T A G T C A C T G A C T G A C T G A T G C C G T A A G T C
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGCGTCGGGCAC
-NGCCTNAGGCN-
 A G T C C G T A A C T G A T G C A C T G A G C T A G T C A C T G A C T G A C T G A T G C C G T A A G T C
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGCGTCGGGCAC
-AGCCTCAGGCA-
 A G T C C G T A A C T G A T G C A C T G A G C T A G T C A C T G A C T G A C T G A T G C C G T A A G T C
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGCGTCGGGCAC
CGCAGCTGCG-----
 A C G T A C G T A G T C C G T A A C T G A T G C A C T G A G C T A G T C A C T G A C T G A C T G A T G C C G T A A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CAGCGTCGGGCAC--
-----CCAGGAACAG
 A G T C C G T A A C T G A T G C A C T G A G C T A G T C A C T G A C T G A C T G A T G C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGTCGGGCAC-
NTNGCCTCAGGCNNN
 A C G T A G T C C G T A A C T G A T G C A C T G A G C T A G T C A C T G A C T G A C T G A T G C C G T A A G T C A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T