Information for 2-CCAGCCCGGMGAGGAG (Motif 3)

A G T C A G T C C G T A A C T G A G T C A T G C A G T C A T C G A C T G G T A C T A C G C G T A C T A G A T C G C G T A A C T G
Reverse Opposite:
A G T C C G A T A T G C G A T C C G A T A T G C A C T G T G A C A T G C A C T G A T C G A C T G G T A C A C G T A C T G A C T G
p-value:1e-12
log p-value:-2.789e+01
Information Content per bp:1.807
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.2 +/- 27.5bp
Average Position of motif in Background84.1 +/- 1.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCAGCCCGGMGAGGAG
-CAGCC----------
 A G T C A G T C C G T A A C T G A G T C A T G C A G T C A T C G A C T G G T A C T A C G C G T A C T A G A T C G C G T A A C T G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CCAGCCCGGMGAGGAG
GGTCCCGCCC---------
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G A G T C A T G C A G T C A T C G A C T G G T A C T A C G C G T A C T A G A T C G C G T A A C T G
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CCAGCCCGGMGAGGAG
ATCCCCGCCCCTAAAA----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A G T C A T G C A G T C A T C G A C T G G T A C T A C G C G T A C T A G A T C G C G T A A C T G
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A A C G T A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----CCAGCCCGGMGAGGAG
NNNTCCATCCCATAANN---
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A G T C A T G C A G T C A T C G A C T G G T A C T A C G C G T A C T A G A T C G C G T A A C T G
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CCAGCCCGGMGAGGAG
-CTGCCCGCA------
 A G T C A G T C C G T A A C T G A G T C A T G C A G T C A T C G A C T G G T A C T A C G C G T A C T A G A T C G C G T A A C T G
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:CCAGCCCGGMGAGGAG
--TGCCCTNAGGGCA-
 A G T C A G T C C G T A A C T G A G T C A T G C A G T C A T C G A C T G G T A C T A C G C G T A C T A G A T C G C G T A A C T G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:CCAGCCCGGMGAGGAG
--TGCCCNNAGGGCA-
 A G T C A G T C C G T A A C T G A G T C A T G C A G T C A T C G A C T G G T A C T A C G C G T A C T A G A T C G C G T A A C T G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---CCAGCCCGGMGAGGAG
ATGCCAGACN---------
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G A G T C A T G C A G T C A T C G A C T G G T A C T A C G C G T A C T A G A T C G C G T A A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCCCGGMGAGGAG
NCCCCCCCGGGGGGN--
 A C G T A G T C A G T C C G T A A C T G A G T C A T G C A G T C A T C G A C T G G T A C T A C G C G T A C T A G A T C G C G T A A C T G
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-CCAGCCCGGMGAGGAG
ACATGCCCGGGCAT---
 A C G T A G T C A G T C C G T A A C T G A G T C A T G C A G T C A T C G A C T G G T A C T A C G C G T A C T A G A T C G C G T A A C T G
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T A C G T A C G T