Information for 13-AGGTTCARAGAAAATN (Motif 20)

C T G A C T A G T A C G A G C T C G A T A G T C C G T A C T G A C T G A A T C G G T C A C G T A T G C A C T G A A C G T G A T C
Reverse Opposite:
C A T G C G T A A G C T A C G T G A C T A C G T A T G C A G C T A G C T A C G T T C A G C G T A C T G A A T G C A G T C A G C T
p-value:1e-9
log p-value:-2.254e+01
Information Content per bp:1.740
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.2 +/- 24.2bp
Average Position of motif in Background53.9 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF7L2/MA0523.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGTTCARAGAAAATN
AAAGATCAAAGGAA---
 A C G T C T G A C T A G T A C G A G C T C G A T A G T C C G T A C T G A C T G A A T C G G T C A C G T A T G C A C T G A A C G T G A T C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGTTCARAGAAAATN
CGGTTTCAAA-------
 A C G T C T G A C T A G T A C G A G C T C G A T A G T C C G T A C T G A C T G A A T C G G T C A C G T A T G C A C T G A A C G T G A T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGGTTCARAGAAAATN
TATAGATCAAAGGAAAA-
 A C G T A C G T C T G A C T A G T A C G A G C T C G A T A G T C C G T A C T G A C T G A A T C G G T C A C G T A T G C A C T G A A C G T G A T C
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGGTTCARAGAAAATN
TATAGATCAAAGGAAAA-
 A C G T A C G T C T G A C T A G T A C G A G C T C G A T A G T C C G T A C T G A C T G A A T C G G T C A C G T A T G C A C T G A A C G T G A T C
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGTTCARAGAAAATN
-NTTTCTNAGAAA---
 C T G A C T A G T A C G A G C T C G A T A G T C C G T A C T G A C T G A A T C G G T C A C G T A T G C A C T G A A C G T G A T C
A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGTTCARAGAAAATN
-ACATCAAAGG-----
 C T G A C T A G T A C G A G C T C G A T A G T C C G T A C T G A C T G A A T C G G T C A C G T A T G C A C T G A A C G T G A T C
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGTTCARAGAAAATN
-ACATCAAAGGNA---
 C T G A C T A G T A C G A G C T C G A T A G T C C G T A C T G A C T G A A T C G G T C A C G T A T G C A C T G A A C G T G A T C
A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGGTTCARAGAAAATN
NNNAGATCAAAGGANNN-
 A C G T A C G T C T G A C T A G T A C G A G C T C G A T A G T C C G T A C T G A C T G A A T C G G T C A C G T A T G C A C T G A A C G T G A T C
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGTTCARAGAAAATN
AAAGATCAAAGGGTT--
 A C G T C T G A C T A G T A C G A G C T C G A T A G T C C G T A C T G A C T G A A T C G G T C A C G T A T G C A C T G A A C G T G A T C
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGGTTCARAGAAAATN
-AGGTCAAGGTCA---
 C T G A C T A G T A C G A G C T C G A T A G T C C G T A C T G A C T G A A T C G G T C A C G T A T G C A C T G A A C G T G A T C
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T