Information for 6-GATTTTATTGCCC (Motif 17)

A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A G T C A G T C G T A C
Reverse Opposite:
A C T G A C T G A C T G T A G C C G T A C G T A C G A T C G T A C G T A C G T A C G T A A C G T A G T C
p-value:1e-10
log p-value:-2.375e+01
Information Content per bp:1.933
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.3 +/- 18.9bp
Average Position of motif in Background50.5 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0013.1_Cdx2/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GATTTTATTGCCC--
NAATTTTATTACCNNN
 A C G T A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A G T C A G T C G T A C A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PH0064.1_Hoxb9/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GATTTTATTGCCC-
NGANTTTTATGGCTCN
 A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A G T C A G T C G T A C A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GATTTTATTGCCC
--TTTTATGGCTN
 A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A G T C A G T C G T A C
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

HOXA10/MA0899.1/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GATTTTATTGCCC
-NTTTTATTACN-
 A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A G T C A G T C G T A C
A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:5
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GATTTTATTGCCC
-TTTTTATTGC--
 A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A G T C A G T C G T A C
A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:6
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GATTTTATTGCCC
-NTTTTATGAC--
 A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A G T C A G T C G T A C
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GATTTTATTGCCC-
NTNAATTTTATTGNATT
 A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A G T C A G T C G T A C A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GATTTTATTGCCC
--TTTTATTGC--
 A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A G T C A G T C G T A C
A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GATTTTATTGCCC--
NAATTTTATTACCTNN
 A C G T A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A G T C A G T C G T A C A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

PH0046.1_Hoxa10/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GATTTTATTGCCC-
TNAATTTTATTACCTN
 A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A T C G A G T C A G T C G T A C A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A