Information for 2-CCCGGAGCCATAA (Motif 5)

A G T C A G T C T A G C C A T G A C T G C G T A A C T G A G T C A G T C G T C A G C A T G T C A C G T A
Reverse Opposite:
G A C T A C G T C G T A A C G T A C T G A C T G A G T C A C G T A G T C G A T C A C T G A C T G C T A G
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.817
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.1 +/- 25.5bp
Average Position of motif in Background56.0 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CCCGGAGCCATAA
--CGGAGC-----
 A G T C A G T C T A G C C A T G A C T G C G T A A C T G A G T C A G T C G T C A G C A T G T C A C G T A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAGCCATAA
TGCCCCCGGGCA---
 A C G T A C G T A G T C A G T C T A G C C A T G A C T G C G T A A C T G A G T C A G T C G T C A G C A T G T C A C G T A
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCCGGAGCCATAA
----CAGCC----
 A G T C A G T C T A G C C A T G A C T G C G T A A C T G A G T C A G T C G T C A G C A T G T C A C G T A
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAGCCATAA
TGCCCCAGGGCA---
 A C G T A C G T A G T C A G T C T A G C C A T G A C T G C G T A A C T G A G T C A G T C G T C A G C A T G T C A C G T A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAGCCATAA--
AGCTCGGCGCCAAAAGC
 A C G T A C G T A G T C A G T C T A G C C A T G A C T G C G T A A C T G A G T C A G T C G T C A G C A T G T C A C G T A A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAGCCATAA--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A G T C A G T C T A G C C A T G A C T G C G T A A C T G A G T C A G T C G T C A G C A T G T C A C G T A A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCGGAGCCATAA
---CGTGCCAAG-
 A G T C A G T C T A G C C A T G A C T G C G T A A C T G A G T C A G T C G T C A G C A T G T C A C G T A
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCGGAGCCATAA
TGCCCCAGGGCA---
 A C G T A C G T A G T C A G T C T A G C C A T G A C T G C G T A A C T G A G T C A G T C G T C A G C A T G T C A C G T A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCCGGAGCCATAA
GRTGMTRGAGCC----
 A C G T A C G T A C G T A G T C A G T C T A G C C A T G A C T G C G T A A C T G A G T C A G T C G T C A G C A T G T C A C G T A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCCGGAGCCATAA
-----TGCCAA--
 A G T C A G T C T A G C C A T G A C T G C G T A A C T G A G T C A G T C G T C A G C A T G T C A C G T A
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T