Information for 5-CCTGAATGAA (Motif 13)

A T G C G T A C C G A T T A C G T C G A G T C A C G A T C T A G T G C A C G T A
Reverse Opposite:
A C G T A C G T A G T C G C T A A C G T A G C T A T G C C G T A A C T G A T C G
p-value:1e-7
log p-value:-1.816e+01
Information Content per bp:1.831
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif174.2
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets48.7 +/- 26.5bp
Average Position of motif in Background50.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CCTGAATGAA----
ACTATGAATGAATGAT
 A C G T A C G T A T G C G T A C C G A T T A C G T C G A G T C A C G A T C T A G T G C A C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGAATGAA
NNTNTCATGAATGT-
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G A T T A C G T C G A G T C A C G A T C T A G T G C A C G T A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCTGAATGAA---
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A T G C G T A C C G A T T A C G T C G A G T C A C G A T C T A G T G C A C G T A A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTGAATGAA--------
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A T G C G T A C C G A T T A C G T C G A G T C A C G A T C T A G T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PB0005.1_Bbx_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTGAATGAA---
NANTTCATTGAATTA
 A C G T A C G T A T G C G T A C C G A T T A C G T C G A G T C A C G A T C T A G T G C A C G T A A C G T A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCTGAATGAA--------
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A T G C G T A C C G A T T A C G T C G A G T C A C G A T C T A G T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCTGAATGAA
--TGACTCA-
 A T G C G T A C C G A T T A C G T C G A G T C A C G A T C T A G T G C A C G T A
A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T

PH0173.1_Uncx/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTGAATGAA-----
CNCNTTAATTAATTANN
 A C G T A C G T A T G C G T A C C G A T T A C G T C G A G T C A C G A T C T A G T G C A C G T A A C G T A C G T A C G T A C G T A C G T
T G A C A T C G A G T C T C A G A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A C G T A G C T C G T A A G C T A C T G

PB0171.1_Sox18_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCTGAATGAA----
GGACTGAATTCATGCC
 A C G T A C G T A T G C G T A C C G A T T A C G T C G A G T C A C G A T C T A G T G C A C G T A A C G T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PH0011.1_Alx1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCTGAATGAA-----
CGCATTAATTAATTGGC
 A C G T A C G T A T G C G T A C C G A T T A C G T C G A G T C A C G A T C T A G T G C A C G T A A C G T A C G T A C G T A C G T A C G T
A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C