Information for 1-GGGGCCTTAATCA (Motif 1)

C T A G A C T G T A C G A C T G G T A C G T A C C G A T A G C T C G T A C G T A G A C T A G T C C G T A
Reverse Opposite:
G A C T A C T G C G T A A C G T C G A T C T G A C G T A A C T G A C T G A G T C A G T C A G T C A G T C
p-value:1e-16
log p-value:-3.686e+01
Information Content per bp:1.810
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.1 +/- 24.3bp
Average Position of motif in Background53.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX2/MA0712.1/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GGGGCCTTAATCA-
------TTAATCCT
 C T A G A C T G T A C G A C T G G T A C G T A C C G A T A G C T C G T A C G T A G A C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGGCCTTAATCA
---TCATCAATCA
 C T A G A C T G T A C G A C T G G T A C G T A C C G A T A G C T C G T A C G T A G A C T A G T C C G T A
A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGGGCCTTAATCA
-RGCCATYAATCA
 C T A G A C T G T A C G A C T G G T A C G T A C C G A T A G C T C G T A C G T A G A C T A G T C C G T A
A C G T C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GGGGCCTTAATCA-
------TTAATCCG
 C T A G A C T G T A C G A C T G G T A C G T A C C G A T A G C T C G T A C G T A G A C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GGGGCCTTAATCA-
------YTAATCCY
 C T A G A C T G T A C G A C T G G T A C G T A C C G A T A G C T C G T A C G T A G A C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGGGCCTTAATCA
NRRGGGTCTT-----
 A C G T A C G T C T A G A C T G T A C G A C T G G T A C G T A C C G A T A G C T C G T A C G T A G A C T A G T C C G T A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGGGCCTTAATCA--
-----CCTAATCCGC
 C T A G A C T G T A C G A C T G G T A C G T A C C G A T A G C T C G T A C G T A G A C T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGGGCCTTAATCA-
------TTAATCCC
 C T A G A C T G T A C G A C T G G T A C G T A C C G A T A G C T C G T A C G T A G A C T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGGCCTTAATCA
AGGTCTCTAACC-
 C T A G A C T G T A C G A C T G G T A C G T A C C G A T A G C T C G T A C G T A G A C T A G T C C G T A
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGGGCCTTAATCA
-GGCCATAAATCA
 C T A G A C T G T A C G A C T G G T A C G T A C C G A T A G C T C G T A C G T A G A C T A G T C C G T A
A C G T C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A