Information for 9-TGGGAAAGCACHG (Motif 6)

C G A T A C T G A C T G A C T G C G T A C G T A G T C A C T A G A G T C C T G A A T G C G T A C A C T G
Reverse Opposite:
A G T C C A T G A T C G A G C T A C T G A G T C A C G T A C G T A C G T A G T C A G T C G T A C C G T A
p-value:1e-10
log p-value:-2.406e+01
Information Content per bp:1.847
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.9 +/- 28.2bp
Average Position of motif in Background39.3 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAAAGCACHG
CSTGGGAAAD-----
 A C G T A C G T C G A T A C T G A C T G A C T G C G T A C G T A G T C A C T A G A G T C C T G A A T G C G T A C A C T G
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGGGAAAGCACHG
--GGAAANCCCC-
 C G A T A C T G A C T G A C T G C G T A C G T A G T C A C T A G A G T C C T G A A T G C G T A C A C T G
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGGGAAAGCACHG
-TGGAAAA-----
 C G A T A C T G A C T G A C T G C G T A C G T A G T C A C T A G A G T C C T G A A T G C G T A C A C T G
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGGGAAAGCACHG
--GGAAATCCCC-
 C G A T A C T G A C T G A C T G C G T A C G T A G T C A C T A G A G T C C T G A A T G C G T A C A C T G
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGGGAAAGCACHG
NNTGGAAANN----
 A C G T C G A T A C T G A C T G A C T G C G T A C G T A G T C A C T A G A G T C C T G A A T G C G T A C A C T G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TGGGAAAGCACHG--
----AAATCACAGCA
 C G A T A C T G A C T G A C T G C G T A C G T A G T C A C T A G A G T C C T G A A T G C G T A C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGGGAAAGCACHG
AATGGAAAAT----
 A C G T C G A T A C T G A C T G A C T G C G T A C G T A G T C A C T A G A G T C C T G A A T G C G T A C A C T G
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGGGAAAGCACHG
--GGAAATTCCC-
 C G A T A C T G A C T G A C T G C G T A C G T A G T C A C T A G A G T C C T G A A T G C G T A C A C T G
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGGGAAAGCACHG
-GGGAAATCCCCN
 C G A T A C T G A C T G A C T G C G T A C G T A G T C A C T A G A G T C C T G A A T G C G T A C A C T G
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGGGAAAGCACHG
NATGGAAAAN----
 A C G T C G A T A C T G A C T G A C T G C G T A C G T A G T C A C T A G A G T C C T G A A T G C G T A C A C T G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T