Information for 5-GAAATTGTAGATATAA (Motif 9)

A C T G G T C A C T G A C T G A C G A T A C G T A T C G G C A T G C T A T C A G C G T A A G C T C G T A C G A T G C T A C G T A
Reverse Opposite:
G A C T C G A T C G T A C G A T T C G A C G A T A G T C C G A T C G T A A T G C C G T A G C T A A G C T A G C T A C G T A G T C
p-value:1e-10
log p-value:-2.526e+01
Information Content per bp:1.688
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif39.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets61.6 +/- 18.0bp
Average Position of motif in Background43.9 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAAATTGTAGATATAA
GGAAAAATTGTTAGGAA--
 A C G T A C G T A C G T A C T G G T C A C T G A C T G A C G A T A C G T A T C G G C A T G C T A T C A G C G T A A G C T C G T A C G A T G C T A C G T A
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAATTGTAGATATAA
AAAATTGTTATGAA--
 A C T G G T C A C T G A C T G A C G A T A C G T A T C G G C A T G C T A T C A G C G T A A G C T C G T A C G A T G C T A C G T A
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAATTGTAGATATAA--
-AAAATGTAAACAAACAG
 A C T G G T C A C T G A C T G A C G A T A C G T A T C G G C A T G C T A T C A G C G T A A G C T C G T A C G A T G C T A C G T A A C G T A C G T
A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAATTGTAGATATAA--
-AAAATGTAAACAAACAG
 A C T G G T C A C T G A C T G A C G A T A C G T A T C G G C A T G C T A T C A G C G T A A G C T C G T A C G A T G C T A C G T A A C G T A C G T
A C G T C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAAATTGTAGATATAA
---TATGTAAATAT--
 A C T G G T C A C T G A C T G A C G A T A C G T A T C G G C A T G C T A T C A G C G T A A G C T C G T A C G A T G C T A C G T A
A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAATTGTAGATATAA--
-TAAATGTAAACAAAGGT
 A C T G G T C A C T G A C T G A C G A T A C G T A T C G G C A T G C T A T C A G C G T A A G C T C G T A C G A T G C T A C G T A A C G T A C G T
A C G T C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAATTGTAGATATAA--
-AAAAAGTAAACAAAGAC
 A C T G G T C A C T G A C T G A C G A T A C G T A T C G G C A T G C T A T C A G C G T A A G C T C G T A C G A T G C T A C G T A A C G T A C G T
A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GAAATTGTAGATATAA
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A C T G A C T G A C G A T A C G T A T C G G C A T G C T A T C A G C G T A A G C T C G T A C G A T G C T A C G T A
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAAATTGTAGATATAA-
GGAAAGCGAAACCAAAAC
 A C G T A C T G G T C A C T G A C T G A C G A T A C G T A T C G G C A T G C T A T C A G C G T A A G C T C G T A C G A T G C T A C G T A A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAATTGTAGATATAA
GAAAGTGAAAGT----
 A C T G G T C A C T G A C T G A C G A T A C G T A T C G G C A T G C T A T C A G C G T A A G C T C G T A C G A T G C T A C G T A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T A C G T