Information for 3-GTGDCAATDTCTBATC (Motif 6)

A T C G A C G T C T A G C A T G A G T C C G T A C G T A A C G T C A G T A C G T A G T C A C G T A C G T C G T A C G A T A G T C
Reverse Opposite:
A C T G C G T A C G A T T G C A C G T A C T A G C G T A G A C T C G T A A C G T A C G T C T A G G T A C A G T C C G T A A T G C
p-value:1e-12
log p-value:-2.838e+01
Information Content per bp:1.786
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 24.1bp
Average Position of motif in Background17.6 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTGDCAATDTCTBATC
TNCNNAACAATTTTTNC--
 A C G T A C G T A C G T A T C G A C G T C T A G C A T G A G T C C G T A C G T A A C G T C A G T A C G T A G T C A C G T A C G T C G T A C G A T A G T C
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGDCAATDTCTBATC
NNTNNCAATATTAG---
 A C G T A T C G A C G T C T A G C A T G A G T C C G T A C G T A A C G T C A G T A C G T A G T C A C G T A C G T C G T A C G A T A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGDCAATDTCTBATC
NNTNNCAATATTAG---
 A C G T A T C G A C G T C T A G C A T G A G T C C G T A C G T A A C G T C A G T A C G T A G T C A C G T A C G T C G T A C G A T A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTGDCAATDTCTBATC
--GACAATGNN-----
 A T C G A C G T C T A G C A T G A G T C C G T A C G T A A C G T C A G T A C G T A G T C A C G T A C G T C G T A C G A T A G T C
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTGDCAATDTCTBATC
NNCNNAACAATTNT-----
 A C G T A C G T A C G T A T C G A C G T C T A G C A T G A G T C C G T A C G T A A C G T C A G T A C G T A G T C A C G T A C G T C G T A C G A T A G T C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTGDCAATDTCTBATC
CCTTGCAATTTTTNN--
 A C G T A T C G A C G T C T A G C A T G A G T C C G T A C G T A A C G T C A G T A C G T A G T C A C G T A C G T C G T A C G A T A G T C
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GTGDCAATDTCTBATC
NNNCAGCTGTCAATATN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T C T A G C A T G A G T C C G T A C G T A A C G T C A G T A C G T A G T C A C G T A C G T C G T A C G A T A G T C
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTGDCAATDTCTBATC
-NAACAAT--------
 A T C G A C G T C T A G C A T G A G T C C G T A C G T A A C G T C A G T A C G T A G T C A C G T A C G T C G T A C G A T A G T C
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTGDCAATDTCTBATC
VGCTGWCAVB--------
 A C G T A C G T A T C G A C G T C T A G C A T G A G T C C G T A C G T A A C G T C A G T A C G T A G T C A C G T A C G T C G T A C G A T A G T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTGDCAATDTCTBATC
RHTGWCAR---------
 A C G T A T C G A C G T C T A G C A T G A G T C C G T A C G T A A C G T C A G T A C G T A G T C A C G T A C G T C G T A C G A T A G T C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T