Information for 1-GAAAGGAAATCAACTT (Motif 3)

A C T G T G C A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A T G C C G T A C G T A T A G C C G A T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C G T C G A T A T C G C G T A A C G T A C G T A C G T T A G C A G T C C G A T A C G T A C G T A G T C
p-value:1e-14
log p-value:-3.253e+01
Information Content per bp:1.805
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.7 +/- 24.2bp
Average Position of motif in Background39.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAAAGGAAATCAACTT
-WATGCAAATGAG---
 A C T G T G C A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A T G C C G T A C G T A T A G C C G A T A C G T
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAAAGGAAATCAACTT
ATATGCAAATNNN---
 A C T G T G C A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A T G C C G T A C G T A T A G C C G A T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAAAGGAAATCAACTT
NACAGGAAAT------
 A C T G T G C A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A T G C C G T A C G T A T A G C C G A T A C G T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAAAGGAAATCAACTT
-TATGCWAATBAV---
 A C T G T G C A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A T G C C G T A C G T A T A G C C G A T A C G T
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAAAGGAAATCAACTT
--AAGGATATNTN---
 A C T G T G C A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A T G C C G T A C G T A T A G C C G A T A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAAAGGAAATCAACTT
AACAAGGAAGTAA----
 A C G T A C T G T G C A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A T G C C G T A C G T A T A G C C G A T A C G T
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGAAATCAACTT
TTGTATGCAAATTAGA--
 A C G T A C G T A C T G T G C A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A T G C C G T A C G T A T A G C C G A T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGAAATCAACTT
TTGTATGCAAATTAGA--
 A C G T A C G T A C T G T G C A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A T G C C G T A C G T A T A G C C G A T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGAAATCAACTT
TTGTATGCAAATTAGA--
 A C G T A C G T A C T G T G C A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A T G C C G T A C G T A T A G C C G A T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAAGGAAATCAACTT-
AAGGCGAAATCATCGCA
 A C T G T G C A C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C G T A T G C C G T A C G T A T A G C C G A T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A