Information for 13-CTGTTGTGGGCAA (Motif 24)

A G T C A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C T G A C T G G T A C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C A G T C A G T C C G T A A T G C C G T A G T C A A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.771e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 12.9bp
Average Position of motif in Background66.6 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CTGTTGTGGGCAA
----TNNGGGCAG
 A G T C A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C T G A C T G G T A C G T C A C G T A
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTGTTGTGGGCAA
----NGTGGGCAT
 A G T C A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C T G A C T G G T A C G T C A C G T A
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTGTTGTGGGCAA-
----CSTGGGAAAD
 A G T C A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C T G A C T G G T A C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGTTGTGGGCAA
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C T G A C T G G T A C G T C A C G T A
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGTTGTGGGCAA
GTNTTGTTGTGANNT-
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C T G A C T G G T A C G T C A C G T A
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGTTGTGGGCAA----
-NNNNTTGGGCACNNCN
 A G T C A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C T G A C T G G T A C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGTTGTGGGCAA
--WDNCTGGGCA-
 A G T C A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C T G A C T G G T A C G T C A C G T A
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

MTF1/MA0863.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGTTGTGGGCAA-
GTGCCGTGTGCAAA
 A G T C A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C T G A C T G G T A C G T C A C G T A A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTGTTGTGGGCAA-
---TTCTTGGAAAN
 A G T C A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C T G A C T G G T A C G T C A C G T A A C G T
A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTGTTGTGGGCAA--
NNNNTTGTGTGCTTNN
 A C G T A G T C A C G T A C T G A C G T A C G T A T C G A C G T A C T G A C T G A C T G G T A C G T C A C G T A A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G