Information for 8-TGAGGCTCCAAGCGTG (Motif 20)

A C G T A C T G C G T A A C T G A T C G A G T C A C G T A T G C A G T C T C G A C G T A A C T G G T A C A C T G A C G T A C T G
Reverse Opposite:
A G T C G T C A A G T C C A T G A G T C A C G T A C G T A C T G A T C G C G T A A C T G A T G C A G T C A C G T A G T C C G T A
p-value:1e-8
log p-value:-2.047e+01
Information Content per bp:1.919
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.0 +/- 11.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.52
Offset:10
Orientation:forward strand
Alignment:TGAGGCTCCAAGCGTG
----------TGCGTG
 A C G T A C T G C G T A A C T G A T C G A G T C A C G T A T G C A G T C T C G A C G T A A C T G G T A C A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TGAGGCTCCAAGCGTG
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C T G C G T A A C T G A T C G A G T C A C G T A T G C A G T C T C G A C G T A A C T G G T A C A C T G A C G T A C T G
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TGAGGCTCCAAGCGTG
CCTTCGGCGCCAAAAGG-
 A C G T A C G T A C G T A C T G C G T A A C T G A T C G A G T C A C G T A T G C A G T C T C G A C G T A A C T G G T A C A C T G A C G T A C T G
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

PAX5/MA0014.2/Jaspar

Match Rank:4
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TGAGGCTCCAAGCGTG--
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C T G C G T A A C T G A T C G A G T C A C G T A T G C A G T C T C G A C G T A A C T G G T A C A C T G A C G T A C T G A C G T A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.48
Offset:4
Orientation:forward strand
Alignment:TGAGGCTCCAAGCGTG
----GCTCCG------
 A C G T A C T G C G T A A C T G A T C G A G T C A C G T A T G C A G T C T C G A C G T A A C T G G T A C A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.48
Offset:9
Orientation:reverse strand
Alignment:TGAGGCTCCAAGCGTG
---------AAGCTTG
 A C G T A C T G C G T A A C T G A T C G A G T C A C G T A T G C A G T C T C G A C G T A A C T G G T A C A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:TGAGGCTCCAAGCGTG--
----TCAGNGAGCGTGAC
 A C G T A C T G C G T A A C T G A T C G A G T C A C G T A T G C A G T C T C G A C G T A A C T G G T A C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TGAGGCTCCAAGCGTG
TTTGGCGCCAAA----
 A C G T A C T G C G T A A C T G A T C G A G T C A C G T A T G C A G T C T C G A C G T A A C T G G T A C A C T G A C G T A C T G
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.46
Offset:3
Orientation:forward strand
Alignment:TGAGGCTCCAAGCGTG---
---GCAGCCAAGCGTGACN
 A C G T A C T G C G T A A C T G A T C G A G T C A C G T A T G C A G T C T C G A C G T A A C T G G T A C A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.46
Offset:8
Orientation:reverse strand
Alignment:TGAGGCTCCAAGCGTG--
--------NNCGCGTGNN
 A C G T A C T G C G T A A C T G A T C G A G T C A C G T A T G C A G T C T C G A C G T A A C T G G T A C A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C