Information for 10-CTGGCATTTCCTT (Motif 8)

A G T C A C G T A C T G A C T G A G T C C G T A A G C T A C G T A C G T A G T C A G T C A C G T A G C T
Reverse Opposite:
C T G A C G T A A C T G C T A G G T C A C G T A C T G A A C G T A C T G A G T C A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.715e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.7 +/- 19.4bp
Average Position of motif in Background57.0 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTGGCATTTCCTT
-GGGAATTTCC--
 A G T C A C G T A C T G A C T G A G T C C G T A A G C T A C G T A C G T A G T C A G T C A C G T A G C T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTGGCATTTCCTT
-GGGGATTTCC--
 A G T C A C G T A C T G A C T G A G T C C G T A A G C T A C G T A C G T A G T C A G T C A C G T A G C T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGGCATTTCCTT
-GGGAATTTCC--
 A G T C A C G T A C T G A C T G A G T C C G T A A G C T A C G T A C G T A G T C A G T C A C G T A G C T
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CTGGCATTTCCTT--
-----ATTTCCTGTN
 A G T C A C G T A C T G A C T G A G T C C G T A A G C T A C G T A C G T A G T C A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTGGCATTTCCTT
GGTCTGGCAT------
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G C T A C G T A C G T A G T C A G T C A C G T A G C T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTGGCATTTCCTT-
----CACTTCCTCT
 A G T C A C G T A C T G A C T G A G T C C G T A A G C T A C G T A C G T A G T C A G T C A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCATTTCCTT
GGTTGGCAT------
 A C G T A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G C T A C G T A C G T A G T C A G T C A C G T A G C T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCATTTCCTT
NTTGGCANN-----
 A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G C T A C G T A C G T A G T C A G T C A C G T A G C T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CTGGCATTTCCTT--
-----ACTTCCTGNT
 A G T C A C G T A C T G A C T G A G T C C G T A A G C T A C G T A C G T A G T C A G T C A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGGCATTTCCTT
-GGGGATTTCC--
 A G T C A C G T A C T G A C T G A G T C C G T A A G C T A C G T A C G T A G T C A G T C A C G T A G C T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T