Information for 5-AAAAAATTCTTCCCTB (Motif 6)

C G T A C G T A C G T A C T G A C T G A C G T A A G C T A G C T A G T C G C A T A C G T A G T C A G T C A G T C A G C T A G T C
Reverse Opposite:
T A C G C T G A A C T G A C T G C T A G G T C A C G T A A C T G C T G A C T G A A C G T A G C T A G C T A C G T G C A T A C G T
p-value:1e-13
log p-value:-3.130e+01
Information Content per bp:1.809
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 17.2bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AAAAAATTCTTCCCTB
TNCNNAACAATTTTTNC---
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A C T G A C G T A A G C T A G C T A G T C G C A T A C G T A G T C A G T C A G T C A G C T A G T C
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAAAAATTCTTCCCTB--
-NANANTTAATCCCNNNN
 C G T A C G T A C G T A C T G A C T G A C G T A A G C T A G C T A G T C G C A T A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C G T
A C G T C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AAAAAATTCTTCCCTB
CTACCAATAAAATTCT------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A C T G A C G T A A G C T A G C T A G T C G C A T A C G T A G T C A G T C A G T C A G C T A G T C
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AAAAAATTCTTCCCTB
TACTGGAAAAAAAA--------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A C T G A C G T A A G C T A G C T A G T C G C A T A C G T A G T C A G T C A G T C A G C T A G T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AAAAAATTCTTCCCTB
NNCNNAACAATTNT------
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A C T G A C G T A A G C T A G C T A G T C G C A T A C G T A G T C A G T C A G T C A G C T A G T C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAAAAATTCTTCCCTB--
-GATAATTAATCCCTCTT
 C G T A C G T A C G T A C T G A C T G A C G T A A G C T A G C T A G T C G C A T A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C G T
A C G T A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

PH0064.1_Hoxb9/Jaspar

Match Rank:7
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AAAAAATTCTTCCCTB
AGAGCCATAAAATTCG------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A C T G A C G T A A G C T A G C T A G T C G C A T A C G T A G T C A G T C A G T C A G C T A G T C
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAAAAATTCTTCCCTB--
-NNNAATTAATCCCCNCN
 C G T A C G T A C G T A C T G A C T G A C G T A A G C T A G C T A G T C G C A T A C G T A G T C A G T C A G T C A G C T A G T C A C G T A C G T
A C G T T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAAAAATTCTTCCCTB
AGAAATGACTTCCCT-
 C G T A C G T A C G T A C T G A C T G A C G T A A G C T A G C T A G T C G C A T A C G T A G T C A G T C A G T C A G C T A G T C
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AAAAAATTCTTCCCTB
TAGGTAATAAAATTCA------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A C T G A C G T A A G C T A G C T A G T C G C A T A C G T A G T C A G T C A G T C A G C T A G T C
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T