Information for 12-AATACACAGC (Motif 17)

C G T A C G T A A C G T C G T A A G T C C G T A G T A C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C G T A C T G A C G T C G T A C G A T A C G T
p-value:1e-6
log p-value:-1.602e+01
Information Content per bp:1.948
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif22.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets45.9 +/- 31.0bp
Average Position of motif in Background54.7 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---AATACACAGC
TCCAATCCACA--
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A G T A C C G T A A C T G A G T C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--AATACACAGC
SSAATCCACANN
 A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A G T A C C G T A A C T G A G T C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AATACACAGC
----CACAGN
 C G T A C G T A A C G T C G T A A G T C C G T A G T A C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AATACACAGC
---ACAAAG-
 C G T A C G T A A C G T C G T A A G T C C G T A G T A C C G T A A C T G A G T C
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AATACACAGC------
-GAGCACAGCAGGACA
 C G T A C G T A A C G T C G T A A G T C C G T A G T A C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AATACACAGC-
AAATCACAGCA
 C G T A C G T A A C G T C G T A A G T C C G T A G T A C C G T A A C T G A G T C A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AATACACAGC
AAATAAACA--
 A C G T C G T A C G T A A C G T C G T A A G T C C G T A G T A C C G T A A C T G A G T C
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AATACACAGC
AAAACAAAGG
 C G T A C G T A A C G T C G T A A G T C C G T A G T A C C G T A A C T G A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AATACACAGC------
-CCACACAGCAGGAGA
 C G T A C G T A A C G T C G T A A G T C C G T A G T A C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AATACACAGC-
AATAAACAATN
 C G T A C G T A A C G T C G T A A G T C C G T A G T A C C G T A A C T G A G T C A C G T
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A