Information for 19-GGTATTCATT (Motif 26)

C T A G A T C G A G C T T C G A A C G T C G A T A G T C C G T A C A G T A G C T
Reverse Opposite:
C T G A G T C A A C G T C T A G G C T A C G T A A G C T C T G A A T G C G A T C
p-value:1e-6
log p-value:-1.515e+01
Information Content per bp:1.829
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif141.3
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets37.0 +/- 24.3bp
Average Position of motif in Background51.6 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGTATTCATT------
NNCATTCATTCATNNN
 C T A G A T C G A G C T T C G A A C G T C G A T A G T C C G T A C A G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGTATTCATT
GHATATKCAT-
 A C G T C T A G A T C G A G C T T C G A A C G T C G A T A G T C C G T A C A G T A G C T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGTATTCATT
GAATATTCAT-
 A C G T C T A G A T C G A G C T T C G A A C G T C G A T A G T C C G T A C A G T A G C T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGTATTCATT-----
-ACATTCATGACACG
 C T A G A T C G A G C T T C G A A C G T C G A T A G T C C G T A C A G T A G C T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGTATTCATT----
AATCAATTCAATAATT
 A C G T A C G T C T A G A T C G A G C T T C G A A C G T C G A T A G T C C G T A C A G T A G C T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGTATTCATT---
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T C T A G A T C G A G C T T C G A A C G T C G A T A G T C C G T A C A G T A G C T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGTATTCATT---
---ATTGATTYND
 C T A G A T C G A G C T T C G A A C G T C G A T A G T C C G T A C A G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGTATTCATT--
GTTAATNATTAA
 C T A G A T C G A G C T T C G A A C G T C G A T A G T C C G T A C A G T A G C T A C G T A C G T
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

ONECUT1/MA0679.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGTATTCATT----
ANTATCGATTTTTN
 C T A G A T C G A G C T T C G A A C G T C G A T A G T C C G T A C A G T A G C T A C G T A C G T A C G T A C G T
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGTATTCATT---
NANAGGGATTAATTATN
 A C G T A C G T A C G T A C G T C T A G A T C G A G C T T C G A A C G T C G A T A G T C C G T A C A G T A G C T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C