Information for 18-WNRCGTAAGA (Motif 25)

C G A T T G C A C T A G G A T C C A T G G C A T T C G A C T G A A C T G T G C A
Reverse Opposite:
A C G T A G T C A G C T A G C T C G T A G T A C C T A G G A T C A C G T G C T A
p-value:1e-7
log p-value:-1.670e+01
Information Content per bp:1.576
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 25.9bp
Average Position of motif in Background77.2 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:WNRCGTAAGA---
---CSTGGGAAAD
 C G A T T G C A C T A G G A T C C A T G G C A T T C G A C T G A A C T G T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

EGR2/MA0472.2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:WNRCGTAAGA--
-TGCGTGGGCGT
 C G A T T G C A C T A G G A T C C A T G G C A T T C G A C T G A A C T G T G C A A C G T A C G T
A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:WNRCGTAAGA---
-NGCGTGGGCGGR
 C G A T T G C A C T A G G A T C C A T G G C A T T C G A C T G A A C T G T G C A A C G T A C G T A C G T
A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:WNRCGTAAGA-
------CAGCC
 C G A T T G C A C T A G G A T C C A T G G C A T T C G A C T G A A C T G T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

ZBTB33/MA0527.1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----WNRCGTAAGA-
NAGNTCTCGCGAGAN
 A C G T A C G T A C G T A C G T C G A T T G C A C T A G G A T C C A T G G C A T T C G A C T G A A C T G T G C A A C G T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:WNRCGTAAGA--
AGGTGHCAGACA
 C G A T T G C A C T A G G A T C C A T G G C A T T C G A C T G A A C T G T G C A A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:WNRCGTAAGA---
---CTYRAGTGSY
 C G A T T G C A C T A G G A T C C A T G G C A T T C G A C T G A A C T G T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:WNRCGTAAGA--
-CAGGTAAGTAT
 C G A T T G C A C T A G G A T C C A T G G C A T T C G A C T G A A C T G T G C A A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

EGR4/MA0733.1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--WNRCGTAAGA----
AANTGCGTGGGCGTNN
 A C G T A C G T C G A T T G C A C T A G G A T C C A T G G C A T T C G A C T G A A C T G T G C A A C G T A C G T A C G T A C G T
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A

GFX(?)/Promoter/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:WNRCGTAAGA--
TCTCGCGAGAAT
 C G A T T G C A C T A G G A T C C A T G G C A T T C G A C T G A A C T G T G C A A C G T A C G T
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T