Information for 15-TAACWATGCA (Motif 20)

A C G T G T C A C G T A G T A C C G T A C T G A C A G T A T C G A G T C C G T A
Reverse Opposite:
G C A T A C T G A T G C G T C A A G C T G C A T A C T G A C G T A C G T G T C A
p-value:1e-9
log p-value:-2.084e+01
Information Content per bp:1.805
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif59.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets49.2 +/- 19.0bp
Average Position of motif in Background52.2 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TAACWATGCA
NAACAAT---
 A C G T G T C A C G T A G T A C C G T A C T G A C A G T A T C G A G T C C G T A
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TAACWATGCA-
CTCATTAATTATGCAT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A G T A C C G T A C T G A C A G T A T C G A G T C C G T A A C G T
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

POU4F1/MA0790.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TAACWATGCA-
CATTAATTATTCAT
 A C G T A C G T A C G T A C G T G T C A C G T A G T A C C G T A C T G A C A G T A T C G A G T C C G T A A C G T
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

POU4F3/MA0791.1/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TAACWATGCA-
CTCATTAATTATGCAT
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A G T A C C G T A C T G A C A G T A T C G A G T C C G T A A C G T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TAACWATGCA-
NNNGTAACTANGNNA
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A G T A C C G T A C T G A C A G T A T C G A G T C C G T A A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAACWATGCA
GTTAACTAGN--
 A C G T A C G T A C G T G T C A C G T A G T A C C G T A C T G A C A G T A T C G A G T C C G T A
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TAACWATGCA-
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A G T A C C G T A C T G A C A G T A T C G A G T C C G T A A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TAACWATGCA---
AATGAACAATGGAATT
 A C G T A C G T A C G T A C G T G T C A C G T A G T A C C G T A C T G A C A G T A T C G A G T C C G T A A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAACWATGCA
GTAAACAAT---
 A C G T A C G T A C G T G T C A C G T A G T A C C G T A C T G A C A G T A T C G A G T C C G T A
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAACWATGCA
VRAACAATGG-
 A C G T A C G T G T C A C G T A G T A C C G T A C T G A C A G T A T C G A G T C C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T