Information for 14-GCTGACCTGA (Motif 19)

A C T G G T A C A C G T C T A G T C G A G A T C A G T C C G A T T C A G G T C A
Reverse Opposite:
C A G T A G T C C G T A C T A G C T A G A G C T A G T C C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.110e+01
Information Content per bp:1.834
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif139.3
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets54.9 +/- 26.3bp
Average Position of motif in Background49.4 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GCTGACCTGA
--TGACCTYA
 A C T G G T A C A C G T C T A G T C G A G A T C A G T C C G A T T C A G G T C A
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GCTGACCTGA
--TGACCT--
 A C T G G T A C A C G T C T A G T C G A G A T C A G T C C G A T T C A G G T C A
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTGACCTGA
AATTTGCTGAC----
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C G T C T A G T C G A G A T C A G T C C G A T T C A G G T C A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCTGACCTGA
CCTCACCTG-
 A C T G G T A C A C G T C T A G T C G A G A T C A G T C C G A T T C A G G T C A
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCTGACCTGA
-GTGACCTT-
 A C T G G T A C A C G T C T A G T C G A G A T C A G T C C G A T T C A G G T C A
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCTGACCTGA--
--TGACCTTGAT
 A C T G G T A C A C G T C T A G T C G A G A T C A G T C C G A T T C A G G T C A A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GCTGACCTGA-
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C G T C T A G T C G A G A T C A G T C C G A T T C A G G T C A A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCTGACCTGA
AAAATGCTGACT---
 A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C G T C T A G T C G A G A T C A G T C C G A T T C A G G T C A
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------GCTGACCTGA
AGGNCANNGTGACCT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C G T C T A G T C G A G A T C A G T C C G A T T C A G G T C A
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GCTGACCTGA
AAAWWTGCTGACWWD-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C G T C T A G T C G A G A T C A G T C C G A T T C A G G T C A
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T