Information for 13-ATGWACCACT (Motif 15)

C G T A C G A T T C A G G C A T G T C A A G T C A G T C T C G A A G T C C G A T
Reverse Opposite:
C G T A A C T G A G C T A C T G C T A G A C G T C G T A A G T C C G T A A C G T
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.764
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.80%
Number of Background Sequences with motif462.7
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets44.6 +/- 28.8bp
Average Position of motif in Background46.8 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ATGWACCACT---
---MRSCACTYAA
 C G T A C G A T T C A G G C A T G T C A A G T C A G T C T C G A A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATGWACCACT
TCATCAATCA--
 A C G T A C G T C G T A C G A T T C A G G C A T G T C A A G T C A G T C T C G A A G T C C G A T
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATGWACCACT--
TTATGTACTAATAA
 A C G T A C G T C G T A C G A T T C A G G C A T G T C A A G T C A G T C T C G A A G T C C G A T A C G T A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:ATGWACCACT----
----ACCACTTGAA
 C G T A C G A T T C A G G C A T G T C A A G T C A G T C T C G A A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATGWACCACT--
GAAGATCAATCACTTA
 A C G T A C G T A C G T A C G T C G T A C G A T T C A G G C A T G T C A A G T C A G T C T C G A A G T C C G A T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:ATGWACCACT---
----ACCACTTAA
 C G T A C G A T T C A G G C A T G T C A A G T C A G T C T C G A A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATGWACCACT---
---AASCACTCAA
 C G T A C G A T T C A G G C A T G T C A A G T C A G T C T C G A A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Hoxa9/MA0594.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATGWACCACT
GCCATAAATCA--
 A C G T A C G T A C G T C G T A C G A T T C A G G C A T G T C A A G T C A G T C T C G A A G T C C G A T
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATGWACCACT--
GAAGATCAATCACTAA
 A C G T A C G T A C G T A C G T C G T A C G A T T C A G G C A T G T C A A G T C A G T C T C G A A G T C C G A T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGWACCACT-------
CTTAACCACTTAAGGAT
 C G T A C G A T T C A G G C A T G T C A A G T C A G T C T C G A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T