Information for 5-WRWRTAAACA (Motif 3)

C G A T T C G A C G A T T C G A A G C T G T C A C G T A C G T A A G T C C G T A
Reverse Opposite:
C G A T C T A G A C G T G C A T A C G T C T G A A G C T G C T A A G C T G C T A
p-value:1e-52
log p-value:-1.218e+02
Information Content per bp:1.631
Number of Target Sequences with motif195.0
Percentage of Target Sequences with motif23.90%
Number of Background Sequences with motif3241.0
Percentage of Background Sequences with motif6.83%
Average Position of motif in Targets50.7 +/- 25.0bp
Average Position of motif in Background49.6 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:WRWRTAAACA--
WWTRTAAACAVG
 C G A T T C G A C G A T T C G A A G C T G T C A C G T A C G T A A G T C C G T A A C G T A C G T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:2
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-WRWRTAAACA-
WWATRTAAACAN
 A C G T C G A T T C G A C G A T T C G A A G C T G T C A C G T A C G T A A G T C C G T A A C G T
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

FOXL1/MA0033.2/Jaspar

Match Rank:3
Score:0.95
Offset:3
Orientation:forward strand
Alignment:WRWRTAAACA
---GTAAACA
 C G A T T C G A C G A T T C G A A G C T G T C A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:WRWRTAAACA
-AAATAAACA
 C G A T T C G A C G A T T C G A A G C T G T C A C G T A C G T A A G T C C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.93
Offset:0
Orientation:forward strand
Alignment:WRWRTAAACA
AAAGTAAACA
 C G A T T C G A C G A T T C G A A G C T G T C A C G T A C G T A A G T C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXO4/MA0848.1/Jaspar

Match Rank:6
Score:0.93
Offset:3
Orientation:forward strand
Alignment:WRWRTAAACA
---GTAAACA
 C G A T T C G A C G A T T C G A A G C T G T C A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T T C A G C G A T T G C A G T C A C T G A G A T C C G T A

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:7
Score:0.93
Offset:3
Orientation:reverse strand
Alignment:WRWRTAAACA---
---GTAAACAWBN
 C G A T T C G A C G A T T C G A A G C T G T C A C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G A T G T C A G T C A T G C A G A T C G C T A G C T A A C T G T C G A

FOXP2/MA0593.1/Jaspar

Match Rank:8
Score:0.93
Offset:1
Orientation:forward strand
Alignment:WRWRTAAACA--
-AAGTAAACAAA
 C G A T T C G A C G A T T C G A A G C T G T C A C G T A C G T A A G T C C G T A A C G T A C G T
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

FOXD2/MA0847.1/Jaspar

Match Rank:9
Score:0.93
Offset:3
Orientation:forward strand
Alignment:WRWRTAAACA
---GTAAACA
 C G A T T C G A C G A T T C G A A G C T G T C A C G T A C G T A A G T C C G T A
A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.93
Offset:3
Orientation:forward strand
Alignment:WRWRTAAACA-
---GTAAACAA
 C G A T T C G A C G A T T C G A A G C T G T C A C G T A C G T A A G T C C G T A A C G T
A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A