p-value: | 1e-7 |
log p-value: | -1.670e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.49% |
Number of Background Sequences with motif | 2.1 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 56.2 +/- 12.2bp |
Average Position of motif in Background | 50.4 +/- 8.5bp |
Strand Bias (log2 ratio + to - strand density) | -1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTATGCATG GHATATKCAT- |
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PH0148.1_Pou3f3/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCTATGCATG----- AAAATATGCATAATAAA |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GCTATGCATG GAATATTCAT- |
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POU2F2/MA0507.1/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GCTATGCATG- TTCATTTGCATAT |
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PB0170.1_Sox17_2/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCTATGCATG----- NTTNTATGAATGTGNNC |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCTATGCATG- NNTNTCATGAATGT |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GCTATGCATG--- GCAGCCAAGCGTGACN |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCTATGCATG BTVATTWGCATA |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GCTATGCATG-- SCAGYCADGCATGAC |
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Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCTATGCATG- -ATTTGCATAA |
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