Information for 4-CTYCMCRRCTTTGVAA (Motif 5)

A G T C G A C T A G C T A T G C G T C A A T G C C T G A T C A G G A T C A C G T C G A T A C G T A C T G T G A C T C G A T G C A
Reverse Opposite:
A C G T A C G T A C T G T G A C G T C A G C T A T G C A C T A G A G T C G A C T T A C G C A G T A T C G T C G A C T G A C T A G
p-value:1e-15
log p-value:-3.525e+01
Information Content per bp:1.545
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.2 +/- 25.4bp
Average Position of motif in Background54.0 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CTYCMCRRCTTTGVAA-
------NATTGTGCAAT
 A G T C G A C T A G C T A T G C G T C A A T G C C T G A T C A G G A T C A C G T C G A T A C G T A C T G T G A C T C G A T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:CTYCMCRRCTTTGVAA---
---------TTTGAAACCG
 A G T C G A C T A G C T A T G C G T C A A T G C C T G A T C A G G A T C A C G T C G A T A C G T A C T G T G A C T C G A T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTYCMCRRCTTTGVAA---
----ANATTTTTGCAANTN
 A G T C G A C T A G C T A T G C G T C A A T G C C T G A T C A G G A T C A C G T C G A T A C G T A C T G T G A C T C G A T G C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CTYCMCRRCTTTGVAA-
-------NNTTGGCANN
 A G T C G A C T A G C T A T G C G T C A A T G C C T G A T C A G G A T C A C G T C G A T A C G T A C T G T G A C T C G A T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CTYCMCRRCTTTGVAA
------NATGTTGCAA
 A G T C G A C T A G C T A T G C G T C A A T G C C T G A T C A G G A T C A C G T C G A T A C G T A C T G T G A C T C G A T G C A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CTYCMCRRCTTTGVAA
--------CTTGGCAA
 A G T C G A C T A G C T A T G C G T C A A T G C C T G A T C A G G A T C A C G T C G A T A C G T A C T G T G A C T C G A T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CTYCMCRRCTTTGVAA-
-------CCTTTGATGT
 A G T C G A C T A G C T A T G C G T C A A T G C C T G A T C A G G A T C A C G T C G A T A C G T A C T G T G A C T C G A T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:CTYCMCRRCTTTGVAA--
--------CSTGGGAAAD
 A G T C G A C T A G C T A T G C G T C A A T G C C T G A T C A G G A T C A C G T C G A T A C G T A C T G T G A C T C G A T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.51
Offset:9
Orientation:forward strand
Alignment:CTYCMCRRCTTTGVAA
---------TTGGCA-
 A G T C G A C T A G C T A T G C G T C A A T G C C T G A T C A G G A T C A C G T C G A T A C G T A C T G T G A C T C G A T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:CTYCMCRRCTTTGVAA-
--------TTATGCAAT
 A G T C G A C T A G C T A T G C G T C A A T G C C T G A T C A G G A T C A C G T C G A T A C G T A C T G T G A C T C G A T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T