Information for 13-CCTGCTGATTGTG (Motif 13)

A G T C A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A T G A C G T C A C G T A A C G T A G T C C G T A A C T G G T A C C G T A A C T G A C T G
p-value:1e-10
log p-value:-2.489e+01
Information Content per bp:1.943
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.2 +/- 11.0bp
Average Position of motif in Background66.3 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CCTGCTGATTGTG
CCTGCTGAGH---
 A G T C A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGATTGTG
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGATTGTG
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CCTGCTGATTGTG
----TTGATTGN-
 A G T C A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGATTGTG
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCTGATTGTG
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCTGATTGTG
AAANTGCTGACTNAG
 A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C T G
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCTGCTGATTGTG
AATTTGCTGAC----
 A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCTGCTGATTGTG-
NAAAANTGCTGACTCAGC
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C T G A C G T
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCTGCTGATTGTG
--TGCTGACTCA-
 A G T C A G T C A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C G T A C T G
A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T