Information for 11-CCDCCGCTGAGGC (Motif 12)

A G T C A T G C C G T A A G T C A G T C A T C G A T G C A C G T A C T G C T G A A C T G A T C G A G T C
Reverse Opposite:
A C T G A T G C A G T C A G C T G T A C C G T A A T C G A T G C A C T G A C T G G A C T A T C G A C T G
p-value:1e-11
log p-value:-2.533e+01
Information Content per bp:1.846
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.9 +/- 28.4bp
Average Position of motif in Background40.8 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)-2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCDCCGCTGAGGC
GACCCCCCGCTGTG--
 A C G T A C G T A C G T A G T C A T G C C G T A A G T C A G T C A T C G A T G C A C G T A C T G C T G A A C T G A T C G A G T C
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCDCCGCTGAGGC
GACCCCCCGCTGCGC-
 A C G T A C G T A C G T A G T C A T G C C G T A A G T C A G T C A T C G A T G C A C G T A C T G C T G A A C T G A T C G A G T C
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCDCCGCTGAGGC
GACCCCCCGCTGTGC-
 A C G T A C G T A C G T A G T C A T G C C G T A A G T C A G T C A T C G A T G C A C G T A C T G C T G A A C T G A T C G A G T C
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCDCCGCTGAGGC
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A G T C A T G C C G T A A G T C A G T C A T C G A T G C A C G T A C T G C T G A A C T G A T C G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCDCCGCTGAGGC
---CAGGTGAGG-
 A G T C A T G C C G T A A G T C A G T C A T C G A T G C A C G T A C T G C T G A A C T G A T C G A G T C
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCDCCGCTGAGGC-----
---NTGCTGAGTCATCCN
 A G T C A T G C C G T A A G T C A G T C A T C G A T G C A C G T A C T G C T G A A C T G A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCDCCGCTGAGGC
CCCCCTGCTGTG--
 A C G T A G T C A T G C C G T A A G T C A G T C A T C G A T G C A C G T A C T G C T G A A C T G A T C G A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCDCCGCTGAGGC--
---HTGCTGAGTCAT
 A G T C A T G C C G T A A G T C A G T C A T C G A T G C A C G T A C T G C T G A A C T G A T C G A G T C A C G T A C G T
A C G T A C G T A C G T G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T

HINFP/MA0131.2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCDCCGCTGAGGC
CAACGTCCGCGG----
 A C G T A C G T A C G T A G T C A T G C C G T A A G T C A G T C A T C G A T G C A C G T A C T G C T G A A C T G A T C G A G T C
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCDCCGCTGAGGC-
----TGCTGAGTCA
 A G T C A T G C C G T A A G T C A G T C A T C G A T G C A C G T A C T G C T G A A C T G A T C G A G T C A C G T
A C G T A C G T A C G T A C G T C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A