Information for 10-AGACAGCCATCCC (Motif 10)

C G T A A C T G G T C A A G T C C G T A A C T G G T A C G A T C C G T A A C G T A T G C T A G C A G T C
Reverse Opposite:
A C T G A T C G A T C G G T C A G A C T C A T G C A T G T A G C C G A T A C T G A C G T T G A C G C A T
p-value:1e-11
log p-value:-2.584e+01
Information Content per bp:1.773
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif46.7
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets60.1 +/- 24.8bp
Average Position of motif in Background52.6 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGACAGCCATCCC------
--NNNTCCATCCCATAANN
 C G T A A C T G G T C A A G T C C G T A A C T G G T A C G A T C C G T A A C G T A T G C T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGCCATCCC
SCAGYCADGCATGAC
 A C G T A C G T C G T A A C T G G T C A A G T C C G T A A C T G G T A C G A T C C G T A A C G T A T G C T A G C A G T C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGACAGCCATCCC
-CACAGN------
 C G T A A C T G G T C A A G T C C G T A A C T G G T A C G A T C C G T A A C G T A T G C T A G C A G T C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGACAGCCATCCC
-GYCATCMATCAT
 C G T A A C T G G T C A A G T C C G T A A C T G G T A C G A T C C G T A A C G T A T G C T A G C A G T C
A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGACAGCCATCCC
AGCAACAGCCGCACC
 A C G T A C G T C G T A A C T G G T C A A G T C C G T A A C T G G T A C G A T C C G T A A C G T A T G C T A G C A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGCCATCCC
CCAGACAG-------
 A C G T A C G T C G T A A C T G G T C A A G T C C G T A A C T G G T A C G A T C C G T A A C G T A T G C T A G C A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGACAGCCATCCC
TGACAGCTGTCA-
 C G T A A C T G G T C A A G T C C G T A A C T G G T A C G A T C C G T A A C G T A T G C T A G C A G T C
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGACAGCCATCCC
CCAGACRSVB-----
 A C G T A C G T C G T A A C T G G T C A A G T C C G T A A C T G G T A C G A T C C G T A A C G T A T G C T A G C A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGACAGCCATCCC
---CAGCC-----
 C G T A A C T G G T C A A G T C C G T A A C T G G T A C G A T C C G T A A C G T A T G C T A G C A G T C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGACAGCCATCCC
-GTCCGCCATTA-
 C G T A A C T G G T C A A G T C C G T A A C T G G T A C G A T C C G T A A C G T A T G C T A G C A G T C
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T