p-value: | 1e-11 |
log p-value: | -2.670e+01 |
Information Content per bp: | 1.817 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.76% |
Number of Background Sequences with motif | 2.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 51.5 +/- 19.8bp |
Average Position of motif in Background | 67.3 +/- 19.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTAATCTGCCCT GCTAATCC----- |
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PH0139.1_Pitx3/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GCTAATCTGCCCT GNNAGCTAATCCCCCN- |
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THAP1/MA0597.1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GCTAATCTGCCCT-- ------CTGCCCGCA |
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GSC/MA0648.1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTAATCTGCCCT GCTAATCCCC--- |
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GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTAATCTGCCCT -YTAATCCY---- |
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Crx/MA0467.1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTAATCTGCCCT -CTAATCCTCTT- |
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GSC2/MA0891.1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTAATCTGCCCT CCTAATCCGC--- |
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OTX1/MA0711.1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCTAATCTGCCCT -TTAATCCG---- |
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OTX2/MA0712.1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCTAATCTGCCCT -TTAATCCT---- |
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Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTAATCTGCCCT NYTAATCCYB--- |
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