Information for 6-CACAGTGGCCCTYSCT (Motif 6)

A T G C C G T A A T G C G T C A A C T G C G A T A C T G A T C G A G T C A G T C T G A C G A C T A G T C T A C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C C T A G C G T A A C T G A C T G A C T G A T G C G T A C C G T A A G T C A C G T A T C G A C G T A T C G
p-value:1e-13
log p-value:-3.084e+01
Information Content per bp:1.787
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.7 +/- 15.2bp
Average Position of motif in Background21.6 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACAGTGGCCCTYSCT
ATGTACAGTAGCAAAG---
 A C G T A C G T A C G T A T G C C G T A A T G C G T C A A C T G C G A T A C T G A T C G A G T C A G T C T G A C G A C T A G T C T A C G A G T C A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CACAGTGGCCCTYSCT
ATTTACAGTAGCAAAA---
 A C G T A C G T A C G T A T G C C G T A A T G C G T C A A C T G C G A T A C T G A T C G A G T C A G T C T G A C G A C T A G T C T A C G A G T C A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CACAGTGGCCCTYSCT
CACAGN----------
 A T G C C G T A A T G C G T C A A C T G C G A T A C T G A T C G A G T C A G T C T G A C G A C T A G T C T A C G A G T C A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CACAGTGGCCCTYSCT
-ACAAAGGNBCCT---
 A T G C C G T A A T G C G T C A A C T G C G A T A C T G A T C G A G T C A G T C T G A C G A C T A G T C T A C G A G T C A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CACAGTGGCCCTYSCT
CGAACAGTGCTCACTAT-
 A C G T A C G T A T G C C G T A A T G C G T C A A C T G C G A T A C T G A T C G A G T C A G T C T G A C G A C T A G T C T A C G A G T C A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CACAGTGGCCCTYSCT
NAGGTCACNNTGACC------
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T G C G T C A A C T G C G A T A C T G A T C G A G T C A G T C T G A C G A C T A G T C T A C G A G T C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CACAGTGGCCCTYSCT
TGACCCAGTGACCTAC---
 A C G T A C G T A C G T A T G C C G T A A T G C G T C A A C T G C G A T A C T G A T C G A G T C A G T C T G A C G A C T A G T C T A C G A G T C A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CACAGTGGCCCTYSCT
CTCACACAATGGCGC-----
 A C G T A C G T A C G T A C G T A T G C C G T A A T G C G T C A A C T G C G A T A C T G A T C G A G T C A G T C T G A C G A C T A G T C T A C G A G T C A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CACAGTGGCCCTYSCT
AGGTCACCCTGACCT-----
 A C G T A C G T A C G T A C G T A T G C C G T A A T G C G T C A A C T G C G A T A C T G A T C G A G T C A G T C T G A C G A C T A G T C T A C G A G T C A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CACAGTGGCCCTYSCT
AACAAAGG--------
 A T G C C G T A A T G C G T C A A C T G C G A T A C T G A T C G A G T C A G T C T G A C G A C T A G T C T A C G A G T C A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T