Information for 20-GGATTGGCCAATC (Motif 30)

A C T G A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C
p-value:1e-3
log p-value:-7.409e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets22.0 +/- 10.5bp
Average Position of motif in Background41.9 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGATTGGCCAATC-
--ACTAGCCAATCA
 A C T G A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.67
Offset:5
Orientation:forward strand
Alignment:GGATTGGCCAATC--
-----AGCCAATCGG
 A C T G A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGATTGGCCAATC--
AAATGGACCAATCAG
 A C T G A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGATTGGCCAATC--------
---TGGACCAATCAGCACTCT
 A C T G A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGATTGGCCAATC
--ATTGCGCAAC-
 A C T G A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C
A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGATTGGCCAATC
---TTGGCA----
 A C T G A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GGATTGGCCAATC
CGTTGGGGATTAGCCT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGATTGGCCAATC
-NATTGTGCAAT-
 A C T G A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C
A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGATTGGCCAATC
GGATTAGC-----
 A C T G A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GGATTGGCCAATC
NNAAGGGATTAACGANT-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T A C G T