Information for 19-CTGCCTAGTAGAA (Motif 27)

A G T C C A G T A C T G A G T C A G T C A C G T C G T A A C T G A C G T C T G A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G C T C G T A A G T C A C G T C G T A A C T G A C T G A G T C G C T A A C T G
p-value:1e-3
log p-value:-8.783e+00
Information Content per bp:1.928
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 30.4bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGCCTAGTAGAA
AGGCCTAG-----
 A G T C C A G T A C T G A G T C A G T C A C G T C G T A A C T G A C G T C T G A A C T G C G T A C G T A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTGCCTAGTAGAA
GATAACATCCTAGTAG--
 A C G T A C G T A C G T A C G T A C G T A G T C C A G T A C T G A G T C A G T C A C G T C G T A A C T G A C G T C T G A A C T G C G T A C G T A
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTGCCTAGTAGAA-
---GCTCGTAAAAA
 A G T C C A G T A C T G A G T C A G T C A C G T C G T A A C T G A C G T C T G A A C T G C G T A C G T A A C G T
A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGCCTAGTAGAA---
AAACCTCGTAAAATTT
 A G T C C A G T A C T G A G T C A G T C A C G T C G T A A C T G A C G T C T G A A C T G C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CTGCCTAGTAGAA
---CCYMATAAAA
 A G T C C A G T A C T G A G T C A G T C A C G T C G T A A C T G A C G T C T G A A C T G C G T A C G T A
A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTGCCTAGTAGAA
-TGCCCAGNHW--
 A G T C C A G T A C T G A G T C A G T C A C G T C G T A A C T G A C G T C T G A A C T G C G T A C G T A
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CTGCCTAGTAGAA---
------AATGGAAAAT
 A G T C C A G T A C T G A G T C A G T C A C G T C G T A A C T G A C G T C T G A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CTGCCTAGTAGAA
------AGAGGAA
 A G T C C A G T A C T G A G T C A G T C A C G T C G T A A C T G A C G T C T G A A C T G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

PH0068.1_Hoxc13/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CTGCCTAGTAGAA---
AAAGCTCGTAAAATTT
 A G T C C A G T A C T G A G T C A G T C A C G T C G T A A C T G A C G T C T G A A C T G C G T A C G T A A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CTGCCTAGTAGAA
AGGCCTNG-----
 A G T C C A G T A C T G A G T C A G T C A C G T C G T A A C T G A C G T C T G A A C T G C G T A C G T A
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T