Information for 18-TGTCAGAGCCCTGTCA (Motif 24)

A C G T A C T G A C G T A T G C C G T A A T C G C G T A A T C G G T A C T A G C A T G C A C G T A C T G A C G T G T A C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C C G T A A T C G A T C G A C T G A T G C C G A T A T G C A C G T A T C G C G T A A G T C C G T A
p-value:1e-5
log p-value:-1.186e+01
Information Content per bp:1.882
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.9 +/- 29.7bp
Average Position of motif in Background55.1 +/- 10.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TGTCAGAGCCCTGTCA----
----AAAGACCTGTCAATCC
 A C G T A C T G A C G T A T G C C G T A A T C G C G T A A T C G G T A C T A G C A T G C A C G T A C T G A C G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.63
Offset:9
Orientation:reverse strand
Alignment:TGTCAGAGCCCTGTCA-
---------GCTGTCAA
 A C G T A C T G A C G T A T G C C G T A A T C G C G T A A T C G G T A C T A G C A T G C A C G T A C T G A C G T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.62
Offset:9
Orientation:reverse strand
Alignment:TGTCAGAGCCCTGTCA-
---------CCTGTCAA
 A C G T A C T G A C G T A T G C C G T A A T C G C G T A A T C G G T A C T A G C A T G C A C G T A C T G A C G T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGTCAGAGCCCTGTCA----
----AAGCACCTGTCAATAT
 A C G T A C T G A C G T A T G C C G T A A T C G C G T A A T C G G T A C T A G C A T G C A C G T A C T G A C G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.60
Offset:10
Orientation:reverse strand
Alignment:TGTCAGAGCCCTGTCA-
----------NTGTCAN
 A C G T A C T G A C G T A T G C C G T A A T C G C G T A A T C G G T A C T A G C A T G C A C G T A C T G A C G T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGTCAGAGCCCTGTCA----
----AATTACCTGTCAATAC
 A C G T A C T G A C G T A T G C C G T A A T C G C G T A A T C G G T A C T A G C A T G C A C G T A C T G A C G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PKNOX2/MA0783.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGTCAGAGCCCTGTCA
----TGACACCTGTCA
 A C G T A C T G A C G T A T G C C G T A A T C G C G T A A T C G G T A C T A G C A T G C A C G T A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAGAGCCCTGTCA---
NTTMRCACNNNVSTGYKAANT
 A C G T A C G T A C G T A C T G A C G T A T G C C G T A A T C G C G T A A T C G G T A C T A G C A T G C A C G T A C T G A C G T G T A C C G T A A C G T A C G T A C G T
G C A T A G C T G A C T T G C A C T G A T A G C C T G A A T G C G A T C A G C T T G C A T C A G A T C G G A C T T A C G G A C T A C T G C T G A C T G A G C T A G C A T

PKNOX1/MA0782.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGTCAGAGCCCTGTCA
----TGACACCTGTCA
 A C G T A C T G A C G T A T G C C G T A A T C G C G T A A T C G G T A C T A G C A T G C A C G T A C T G A C G T G T A C C G T A
A C G T A C G T A C G T A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGTCAGAGCCCTGTCA----
----AAAGACCTGTCAATAC
 A C G T A C T G A C G T A T G C C G T A A T C G C G T A A T C G G T A C T A G C A T G C A C G T A C T G A C G T G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C