Information for 17-TCAGGCCATAACAGGA (Motif 21)

A C G T A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A C T G A C G T A C G T C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C T G C G T A
p-value:1e-8
log p-value:-1.935e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 12.6bp
Average Position of motif in Background21.5 +/- 0.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCAGGCCATAACAGGA-
--ATGTCACAACAACAC
 A C G T A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C T G C G T A A C G T
A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCAGGCCATAACAGGA
--AAGCCATAAAA---
 A C G T A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C T G C G T A
A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCAGGCCATAACAGGA
---GNCTATAAAAGG-
 A C G T A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C T G C G T A
A C G T A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCAGGCCATAACAGGA
ATCACCCCAT-------
 A C G T A C G T A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C T G C G T A
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCAGGCCATAACAGGA
ATCACCCCAT-------
 A C G T A C G T A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C T G C G T A
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:9
Orientation:forward strand
Alignment:TCAGGCCATAACAGGA---
---------AACAGGAAGT
 A C G T A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

PH0012.1_Cdx1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCAGGCCATAACAGGA
TAAGGTAATAAAATTA
 A C G T A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C T G C G T A
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCAGGCCATAACAGGA
---TNCCATATATGG-
 A C G T A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C T G C G T A
A C G T A C G T A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCAGGCCATAACAGGA
CNGTCACGCCAC-------
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C T G C G T A
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TCAGGCCATAACAGGA--
-AACACCAAAACAAAGGA
 A C G T A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G A C T G C G T A A C G T A C G T
A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A