Information for 9-ARCAGYTGTWGRC (Motif 16)

C G T A C T G A A G T C C G T A A C T G A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C
Reverse Opposite:
A T C G A G C T A G T C C G A T C T G A A G T C C G T A C T A G A G T C A C G T A C T G A G C T A C G T
p-value:1e-9
log p-value:-2.257e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.7 +/- 23.1bp
Average Position of motif in Background49.2 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSC/MA0665.1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:ARCAGYTGTWGRC
AACAGCTGTT---
 C G T A C T G A A G T C C G T A A C T G A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C
T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T A C G T A C G T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:ARCAGYTGTWGRC
AACAGCTGTT---
 C G T A C T G A A G T C C G T A A C T G A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C
T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T A C G T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--ARCAGYTGTWGRC
GCAACAGCTGTTGT-
 A C G T A C G T C G T A C T G A A G T C C G T A A C T G A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:4
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-ARCAGYTGTWGRC
BAACAGCTGT----
 A C G T C G T A C T G A A G T C C G T A A C T G A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:ARCAGYTGTWGRC
ATCAGCTGTT---
 C G T A C T G A A G T C C G T A A C T G A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C
T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-ARCAGYTGTWGRC
CAGCAGCTGN----
 A C G T C G T A C T G A A G T C C G T A A C T G A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--ARCAGYTGTWGRC
NNAGCAGCTGCT---
 A C G T A C G T C G T A C T G A A G T C C G T A A C T G A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:ARCAGYTGTWGRC
AGCAGCTGCT---
 C G T A C T G A A G T C C G T A A C T G A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-ARCAGYTGTWGRC
NAACAGCTGT----
 A C G T C G T A C T G A A G T C C G T A A C T G A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ARCAGYTGTWGRC
AACAGCTG-----
 C G T A C T G A A G T C C G T A A C T G A G T C A C G T A C T G A G C T C G T A A C T G C T G A A T G C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T