Information for 11-GGKGSACAGMKCAMRG (Motif 13)

C T A G C T A G C A G T A C T G A T G C C G T A A G T C C G T A A C T G G T C A A C T G A G T C C G T A G T A C C T A G A C T G
Reverse Opposite:
A G T C G A T C C A T G A C G T A C T G G T A C C A G T A G T C A C G T A C T G A C G T A T C G A G T C G T C A A G T C A G T C
p-value:1e-10
log p-value:-2.501e+01
Information Content per bp:1.835
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 22.5bp
Average Position of motif in Background44.3 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGKGSACAGMKCAMRG
TGGGGCAAAGGTCA---
 A C G T C T A G C T A G C A G T A C T G A T G C C G T A A G T C C G T A A C T G G T C A A C T G A G T C C G T A G T A C C T A G A C T G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGKGSACAGMKCAMRG
TAGGGCAAAGGTCA---
 A C G T C T A G C T A G C A G T A C T G A T G C C G T A A G T C C G T A A C T G G T C A A C T G A G T C C G T A G T A C C T A G A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGKGSACAGMKCAMRG
GTAGGGCAAAGGTCA---
 A C G T A C G T C T A G C T A G C A G T A C T G A T G C C G T A A G T C C G T A A C T G G T C A A C T G A G T C C G T A G T A C C T A G A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGKGSACAGMKCAMRG
----CACAGN------
 C T A G C T A G C A G T A C T G A T G C C G T A A G T C C G T A A C T G G T C A A C T G A G T C C G T A G T A C C T A G A C T G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GGKGSACAGMKCAMRG-
-----AAAGATCAAAGG
 C T A G C T A G C A G T A C T G A T G C C G T A A G T C C G T A A C T G G T C A A C T G A G T C C G T A G T A C C T A G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGKGSACAGMKCAMRG
AGAGTCCAAAGTCCA---
 A C G T A C G T C T A G C T A G C A G T A C T G A T G C C G T A A G T C C G T A A C T G G T C A A C T G A G T C C G T A G T A C C T A G A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGKGSACAGMKCAMRG
CANAGNNCAAAGTCCA---
 A C G T A C G T A C G T C T A G C T A G C A G T A C T G A T G C C G T A A G T C C G T A A C T G G T C A A C T G A G T C C G T A G T A C C T A G A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGKGSACAGMKCAMRG----
-----AAAGATCAAAGGGTT
 C T A G C T A G C A G T A C T G A T G C C G T A A G T C C G T A A C T G G T C A A C T G A G T C C G T A G T A C C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GGKGSACAGMKCAMRG-----
----NANAGATCAAAGGGNNN
 C T A G C T A G C A G T A C T G A T G C C G T A A G T C C G T A A C T G G T C A A C T G A G T C C G T A G T A C C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGKGSACAGMKCAMRG
AGAGRRACAGCWGAC--
 A C G T C T A G C T A G C A G T A C T G A T G C C G T A A G T C C G T A A C T G G T C A A C T G A G T C C G T A G T A C C T A G A C T G
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T