Information for 3-CCACTAGGGGGCA (Motif 3)

G A T C A G T C G T C A A T G C G A C T C T G A A C T G C T A G A C T G A C T G A C T G G T A C T C G A
Reverse Opposite:
A G C T A C T G A G T C A G T C G T A C G A T C A G T C A G C T C T G A A T C G C A G T A C T G C A T G
p-value:1e-18
log p-value:-4.281e+01
Information Content per bp:1.790
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif22.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.5 +/- 22.3bp
Average Position of motif in Background56.2 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGGGGGCA----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T G A T C A G T C G T C A A T G C G A C T C T G A A C T G C T A G A C T G A C T G A C T G G T A C T C G A A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGGGGGCA------
GCCASCAGGGGGCGCYVNNG
 A C G T G A T C A G T C G T C A A T G C G A C T C T G A A C T G C T A G A C T G A C T G A C T G G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---CCACTAGGGGGCA---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G A T C A G T C G T C A A T G C G A C T C T G A A C T G C T A G A C T G A C T G A C T G G T A C T C G A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CCACTAGGGGGCA-
-----NGTGGGCAT
 G A T C A G T C G T C A A T G C G A C T C T G A A C T G C T A G A C T G A C T G A C T G G T A C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGGGGGCA
CACCCCCGGGGGGG-
 A C G T A C G T G A T C A G T C G T C A A T G C G A C T C T G A A C T G C T A G A C T G A C T G A C T G G T A C T C G A
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CCACTAGGGGGCA-
-----GGTTGGCAT
 G A T C A G T C G T C A A T G C G A C T C T G A A C T G C T A G A C T G A C T G A C T G G T A C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Znf423/MA0116.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGGGGGCA
GCACCCCTGGGTGCC-
 A C G T A C G T A C G T G A T C A G T C G T C A A T G C G A C T C T G A A C T G C T A G A C T G A C T G A C T G G T A C T C G A
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCACTAGGGGGCA-----
-NNNAAGGGGGCGGGNNN
 G A T C A G T C G T C A A T G C G A C T C T G A A C T G C T A G A C T G A C T G A C T G G T A C T C G A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCACTAGGGGGCA-----
-GGCGAGGGGTCAAGGGC
 G A T C A G T C G T C A A T G C G A C T C T G A A C T G C T A G A C T G A C T G A C T G G T A C T C G A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCACTAGGGGGCA
ACCCCCCCGGGGGGN
 A C G T A C G T G A T C A G T C G T C A A T G C G A C T C T G A A C T G C T A G A C T G A C T G A C T G G T A C T C G A
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G