Information for 9-GTTTAATCTG (Motif 17)

A T C G A C G T A G C T A C G T G T C A C T G A C G A T A G T C C G A T C T A G
Reverse Opposite:
A G T C C G T A A C T G C G T A A G C T A C G T T G C A C T G A C G T A A T G C
p-value:1e-8
log p-value:-1.912e+01
Information Content per bp:1.846
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif54.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets40.9 +/- 27.8bp
Average Position of motif in Background49.9 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GTTTAATCTG
-TTTAAT---
 A T C G A C G T A G C T A C G T G T C A C T G A C G A T A G T C C G A T C T A G
A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTTTAATCTG
--TTAATCCG
 A T C G A C G T A G C T A C G T G T C A C T G A C G A T A G T C C G A T C T A G
A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTTTAATCTG
--TTAATCCT
 A T C G A C G T A G C T A C G T G T C A C T G A C G A T A G T C C G A T C T A G
A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTTTAATCTG
--YTAATCCY
 A T C G A C G T A G C T A C G T G T C A C T G A C G A T A G T C C G A T C T A G
A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTTTAATCTG-----
-NNTAATCCNGNCNN
 A T C G A C G T A G C T A C G T G T C A C T G A C G A T A G T C C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTTTAATCTG-
-CCTAATCCGC
 A T C G A C G T A G C T A C G T G T C A C T G A C G A T A G T C C G A T C T A G A C G T
A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTTTAATCTG-
TGTTTACTTAGG
 A C G T A T C G A C G T A G C T A C G T G T C A C T G A C G A T A G T C C G A T C T A G A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTTTAATCTG
--TTAATCCC
 A T C G A C G T A G C T A C G T G T C A C T G A C G A T A G T C C G A T C T A G
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTTTAATCTG
-TCTTATCT-
 A T C G A C G T A G C T A C G T G T C A C T G A C G A T A G T C C G A T C T A G
A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTTTAATCTG----
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A T C G A C G T A G C T A C G T G T C A C T G A C G A T A G T C C G A T C T A G A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G