Information for 5-KCAGATYRCTATC (Motif 5)

A C T G T A G C C G T A C T A G C G T A A C G T G A C T T C G A T A G C G C A T C G T A A C G T A T G C
Reverse Opposite:
A T C G G T C A A C G T C G T A A T C G A G C T C T G A C G T A C G A T A G T C C G A T A T C G T G A C
p-value:1e-19
log p-value:-4.407e+01
Information Content per bp:1.707
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.5 +/- 19.2bp
Average Position of motif in Background66.7 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:KCAGATYRCTATC--
NNAGATNVNWATCTN
 A C T G T A G C C G T A C T A G C G T A A C G T G A C T T C G A T A G C G C A T C G T A A C G T A T G C A C G T A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

GATA2/MA0036.2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:KCAGATYRCTATC-
NCAGATAAGAANNN
 A C T G T A G C C G T A C T A G C G T A A C G T G A C T T C G A T A G C G C A T C G T A A C G T A T G C A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:KCAGATYRCTATC
--AGATAASR---
 A C T G T A G C C G T A C T A G C G T A A C G T G A C T T C G A T A G C G C A T C G T A A C G T A T G C
A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-KCAGATYRCTATC---
AGCTGTTAACTAGCCGT
 A C G T A C T G T A G C C G T A C T A G C G T A A C G T G A C T T C G A T A G C G C A T C G T A A C G T A T G C A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

GATA5/MA0766.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:KCAGATYRCTATC
--AGATAAGA---
 A C T G T A G C C G T A C T A G C G T A A C G T G A C T T C G A T A G C G C A T C G T A A C G T A T G C
A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:KCAGATYRCTATC-
--AGGTCTCTAACC
 A C T G T A G C C G T A C T A G C G T A A C G T G A C T T C G A T A G C G C A T C G T A A C G T A T G C A C G T
A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---KCAGATYRCTATC-
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C T G T A G C C G T A C T A G C G T A A C G T G A C T T C G A T A G C G C A T C G T A A C G T A T G C A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---KCAGATYRCTATC
GKVTCADRTTWC----
 A C G T A C G T A C G T A C T G T A G C C G T A C T A G C G T A A C G T G A C T T C G A T A G C G C A T C G T A A C G T A T G C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:KCAGATYRCTATC
--DGATCRATAN-
 A C T G T A G C C G T A C T A G C G T A A C G T G A C T T C G A T A G C G C A T C G T A A C G T A T G C
A C G T A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-KCAGATYRCTATC
AACAGATGGC----
 A C G T A C T G T A G C C G T A C T A G C G T A A C G T G A C T T C G A T A G C G C A T C G T A A C G T A T G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T