Information for 21-AGHTWCAMAA (Motif 30)

G T C A C T A G G T A C A C G T C G T A G T A C C G T A G T C A C G T A C T G A
Reverse Opposite:
A G C T A C G T A C G T A C G T C A T G C G A T G T C A C A T G A G T C C A G T
p-value:1e-5
log p-value:-1.366e+01
Information Content per bp:1.716
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif182.2
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets48.5 +/- 30.6bp
Average Position of motif in Background45.8 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGHTWCAMAA
CGGTTTCAAA-
 A C G T G T C A C T A G G T A C A C G T C G T A G T A C C G T A G T C A C G T A C T G A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGHTWCAMAA-
--GTAAACAAT
 G T C A C T A G G T A C A C G T C G T A G T A C C G T A G T C A C G T A C T G A A C G T
A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

Foxj3/MA0851.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGHTWCAMAA----
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T G T C A C T A G G T A C A C G T C G T A G T A C C G T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGHTWCAMAA----
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T G T C A C T A G G T A C A C G T C G T A G T A C C G T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGHTWCAMAA-
-VTTRCATAAY
 G T C A C T A G G T A C A C G T C G T A G T A C C G T A G T C A C G T A C T G A A C G T
A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

NFIL3/MA0025.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGHTWCAMAA
ANGTTACATAA
 A C G T G T C A C T A G G T A C A C G T C G T A G T A C C G T A G T C A C G T A C T G A
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A

CEBPA/MA0102.3/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGHTWCAMAA--
-ATTGCACAATA
 G T C A C T A G G T A C A C G T C G T A G T A C C G T A G T C A C G T A C T G A A C G T A C G T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGHTWCAMAA
-NATTCAAAT
 G T C A C T A G G T A C A C G T C G T A G T A C C G T A G T C A C G T A C T G A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGHTWCAMAA
--GTAAACAA
 G T C A C T A G G T A C A C G T C G T A G T A C C G T A G T C A C G T A C T G A
A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGHTWCAMAA----
CAATTGCAAAAATAT
 A C G T G T C A C T A G G T A C A C G T C G T A G T A C C G T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T