Information for 19-TGCGTGGAGG (Motif 27)

A C G T A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T G T A C A G T C C G T A A G T C A C T G A G T C C G T A
p-value:1e-6
log p-value:-1.596e+01
Information Content per bp:1.960
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 32.4bp
Average Position of motif in Background57.3 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGCGTGGAGG
TGCGTG----
 A C G T A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C T G
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGCGTGGAGG
TTGCGTGCVA-
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C T G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

EGR2/MA0472.2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGCGTGGAGG-
TGCGTGGGCGT
 A C G T A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C T G A C G T
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TGCGTGGAGG
---GTGGAT-
 A C G T A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C T G
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGCGTGGAGG---
ANTGCGTGGGCGTNN
 A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C T G A C G T A C G T A C G T
C G T A C T A G G A C T C T A G A G T C T A C G A C G T T C A G C T A G A T C G G A T C C T A G C A G T C T G A C T A G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGCGTGGAGG
TGCGTGGGYG
 A C G T A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C T G
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

EGR4/MA0733.1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGCGTGGAGG---
AANTGCGTGGGCGTNN
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C T G A C G T A C G T A C G T
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCGTGGAGG--
NGCGTGGGCGGR
 A C G T A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C T G A C G T A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCGTGGAGG
GGACGTGC---
 A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGTGGAGG-
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C T G A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A