Information for 11-AAGMATCAGMCYRMCC (Motif 24)

G T C A C T G A A C T G G T A C C G T A A C G T A G T C C G T A A C T G T G A C A G T C A G C T C T G A G T C A G T A C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G C T C T G A A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A G T C A G C T A C G T
p-value:1e-7
log p-value:-1.760e+01
Information Content per bp:1.858
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 26.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGMATCAGMCYRMCC
-AGCAACAGCCGCACC
 G T C A C T G A A C T G G T A C C G T A A C G T A G T C C G T A A C T G T G A C A G T C A G C T C T G A G T C A G T A C A G T C
A C G T T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AAGMATCAGMCYRMCC
-----BCAGACWA---
 G T C A C T G A A C T G G T A C C G T A A C G T A G T C C G T A A C T G T G A C A G T C A G C T C T G A G T C A G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AAGMATCAGMCYRMCC
----ATCACCCCAT--
 G T C A C T G A A C T G G T A C C G T A A C G T A G T C C G T A A C T G T G A C A G T C A G C T C T G A G T C A G T A C A G T C
A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AAGMATCAGMCYRMCC
AAACMATTAN-------
 A C G T G T C A C T G A A C T G G T A C C G T A A C G T A G T C C G T A A C T G T G A C A G T C A G C T C T G A G T C A G T A C A G T C
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AAGMATCAGMCYRMCC
----ATCACCCCAT--
 G T C A C T G A A C T G G T A C C G T A A C G T A G T C C G T A A C T G T G A C A G T C A G C T C T G A G T C A G T A C A G T C
A C G T A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AAGMATCAGMCYRMCC
----ATCACCCCAC--
 G T C A C T G A A C T G G T A C C G T A A C G T A G T C C G T A A C T G T G A C A G T C A G C T C T G A G T C A G T A C A G T C
A C G T A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-AAGMATCAGMCYRMCC
NATGAGTCANN------
 A C G T G T C A C T G A A C T G G T A C C G T A A C G T A G T C C G T A A C T G T G A C A G T C A G C T C T G A G T C A G T A C A G T C
T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.48
Offset:5
Orientation:forward strand
Alignment:AAGMATCAGMCYRMCC
-----TCAGTCTT---
 G T C A C T G A A C T G G T A C C G T A A C G T A G T C C G T A A C T G T G A C A G T C A G C T C T G A G T C A G T A C A G T C
A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--AAGMATCAGMCYRMCC
TCACCCATCAATAAACA-
 A C G T A C G T G T C A C T G A A C T G G T A C C G T A A C G T A G T C C G T A A C T G T G A C A G T C A G C T C T G A G T C A G T A C A G T C
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:AAGMATCAGMCYRMCC
-NAGGTCACNNTGACC
 G T C A C T G A A C T G G T A C C G T A A C G T A G T C C G T A A C T G T G A C A G T C A G C T C T G A G T C A G T A C A G T C
A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C