Information for 15-CCTATGCAGA (Motif 16)

A G T C A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C T G C G T A
Reverse Opposite:
C G A T A G T C A C G T A C T G A G T C C G T A A C G T C G T A A C T G A C T G
p-value:1e-9
log p-value:-2.282e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.6 +/- 14.9bp
Average Position of motif in Background55.7 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1B/MA0792.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCTATGCAGA-
--TATGCAAAT
 A G T C A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C T G C G T A A C G T
A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

POU3F4/MA0789.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCTATGCAGA-
--TATGCAAAT
 A G T C A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C T G C G T A A C G T
A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

PH0148.1_Pou3f3/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCTATGCAGA----
TNNATTATGCATANNTT
 A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCTATGCAGA-
-ATATGCAAAT
 A G T C A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C T G C G T A A C G T
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCTATGCAGA-
-TTATGCAAAT
 A G T C A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C T G C G T A A C G T
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCTATGCAGA-----
TTGTATGCAAATTAGA
 A C G T A G T C A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCTATGCAGA-----
TTGTATGCAAATTAGA
 A C G T A G T C A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCTATGCAGA-----
TTGTATGCAAATTAGA
 A C G T A G T C A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCTATGCAGA----
-ATATGCAAATNNN
 A G T C A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCTATGCAGA
GHATATKCAT-
 A C G T A G T C A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C T G C G T A
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T