Information for 13-GCCTATTCTCAGC (Motif 15)

A T C G A T G C A G T C A G C T G C T A A C G T C G A T A T G C A C G T A G T C C G T A A C T G G T A C
Reverse Opposite:
A C T G A G T C A C G T A C T G C G T A A T C G C G T A C G T A C G A T C T G A C T A G A T C G A T G C
p-value:1e-9
log p-value:-2.202e+01
Information Content per bp:1.835
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.6 +/- 27.0bp
Average Position of motif in Background68.3 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCTATTCTCAGC---
-AGTATTCTCGGTTGC
 A T C G A T G C A G T C A G C T G C T A A C G T C G A T A T G C A C G T A G T C C G T A A C T G G T A C A C G T A C G T A C G T
A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GCCTATTCTCAGC---
----TTTCTNAGAAAN
 A T C G A T G C A G T C A G C T G C T A A C G T C G A T A T G C A C G T A G T C C G T A A C T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCCTATTCTCAGC
--CTATTTTTGG-
 A T C G A T G C A G T C A G C T G C T A A C G T C G A T A T G C A C G T A G T C C G T A A C T G G T A C
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCCTATTCTCAGC
---HTTTCCCASG
 A T C G A T G C A G T C A G C T G C T A A C G T C G A T A T G C A C G T A G T C C G T A A C T G G T A C
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCTATTCTCAGC
NNGCACCTTTCTCC--
 A C G T A C G T A C G T A T C G A T G C A G T C A G C T G C T A A C G T C G A T A T G C A C G T A G T C C G T A A C T G G T A C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCTATTCTCAGC---
NTNTTCTTATCAGTNTN
 A C G T A T C G A T G C A G T C A G C T G C T A A C G T C G A T A T G C A C G T A G T C C G T A A C T G G T A C A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCCTATTCTCAGC
-----YTGWCADY
 A T C G A T G C A G T C A G C T G C T A A C G T C G A T A T G C A C G T A G T C C G T A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCTATTCTCAGC
--CCWTTGTY---
 A T C G A T G C A G T C A G C T G C T A A C G T C G A T A T G C A C G T A G T C C G T A A C T G G T A C
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCCTATTCTCAGC--
----TTTCCCAGAAN
 A T C G A T G C A G T C A G C T G C T A A C G T C G A T A T G C A C G T A G T C C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCCTATTCTCAGC-
---ATTTCCAAGAA
 A T C G A T G C A G T C A G C T G C T A A C G T C G A T A T G C A C G T A G T C C G T A A C T G G T A C A C G T
A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A