Information for 9-CTGCAACACCACA (Motif 11)

A G T C C G A T A T C G A T G C G C T A G C T A T A G C T C G A A G T C T A G C G T C A A T G C C T G A
Reverse Opposite:
A G C T A T C G A C G T A C T G T C A G A C G T A C T G C G A T C G A T A T C G A T G C C G T A A C T G
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.761
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif64.2
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets51.6 +/- 24.8bp
Average Position of motif in Background45.3 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CTGCAACACCACA---
----NWAACCACADNN
 A G T C C G A T A T C G A T G C G C T A G C T A T A G C T C G A A G T C T A G C G T C A A T G C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CTGCAACACCACA--
-----AAACCACAGC
 A G T C C G A T A T C G A T G C G C T A G C T A T A G C T C G A A G T C T A G C G T C A A T G C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CTGCAACACCACA---
-----AAACCACAGAN
 A G T C C G A T A T C G A T G C G C T A G C T A T A G C T C G A A G T C T A G C G T C A A T G C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTGCAACACCACA-
----NAAACCACAG
 A G T C C G A T A T C G A T G C G C T A G C T A T A G C T C G A A G T C T A G C G T C A A T G C C T G A A C G T
A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CTGCAACACCACA--
-----AAACCACANN
 A G T C C G A T A T C G A T G C G C T A G C T A T A G C T C G A A G T C T A G C G T C A A T G C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGCAACACCACA
TTGCAACATN---
 A G T C C G A T A T C G A T G C G C T A G C T A T A G C T C G A A G T C T A G C G T C A A T G C C T G A
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAACACCACA
TGCCTGCGYCMCCTT-
 A C G T A C G T A C G T A G T C C G A T A T C G A T G C G C T A G C T A T A G C T C G A A G T C T A G C G T C A A T G C C T G A
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTGCAACACCACA--
-----AAACCGCAAA
 A G T C C G A T A T C G A T G C G C T A G C T A T A G C T C G A A G T C T A G C G T C A A T G C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTGCAACACCACA
AGATGCAATCCC---
 A C G T A C G T A G T C C G A T A T C G A T G C G C T A G C T A T A G C T C G A A G T C T A G C G T C A A T G C C T G A
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTGCAACACCACA-
-----AAACCGCAA
 A G T C C G A T A T C G A T G C G C T A G C T A T A G C T C G A A G T C T A G C G T C A A T G C C T G A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A