Information for 25-TCAGTGCCTCTGTTCT (Motif 40)

A C G T A G T C G C T A A C T G A C G T C T A G A G T C A G T C A C G T A G T C C G A T A T C G A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A A T G C C G T A C T A G C G T A A C T G A C T G A G T C C G T A A G T C C G A T A C T G C G T A
p-value:1e-6
log p-value:-1.417e+01
Information Content per bp:1.925
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 15.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TCAGTGCCTCTGTTCT
------CCTTTGTTTT
 A C G T A G T C G C T A A C T G A C G T C T A G A G T C A G T C A C G T A G T C C G A T A T C G A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TCAGTGCCTCTGTTCT
------YCTTTGTTCC
 A C G T A G T C G C T A A C T G A C G T C T A G A G T C A G T C A C G T A G T C C G A T A T C G A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCAGTGCCTCTGTTCT---
--NNNTCCTTTGTTCTNNN
 A C G T A G T C G C T A A C T G A C G T C T A G A G T C A G T C A C G T A G T C C G A T A T C G A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCAGTGCCTCTGTTCT---
--TNNTCCTTTGTTCTNNT
 A C G T A G T C G C T A A C T G A C G T C T A G A G T C A G T C A C G T A G T C C G A T A T C G A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCAGTGCCTCTGTTCT
-CACTTCCTCT-----
 A C G T A G T C G C T A A C T G A C G T C T A G A G T C A G T C A C G T A G T C C G A T A T C G A C G T A C G T A G T C A C G T
A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCAGTGCCTCTGTTCT
-CACTTCCYCTTT---
 A C G T A G T C G C T A A C T G A C G T C T A G A G T C A G T C A C G T A G T C C G A T A T C G A C G T A C G T A G T C A C G T
A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TCAGTGCCTCTGTTCT
------CCTTTGTT--
 A C G T A G T C G C T A A C T G A C G T C T A G A G T C A G T C A C G T A G T C C G A T A T C G A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TCAGTGCCTCTGTTCT
-----NCCATTGTTC-
 A C G T A G T C G C T A A C T G A C G T C T A G A G T C A G T C A C G T A G T C C G A T A T C G A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TCAGTGCCTCTGTTCT
----TNCCTTTGATGT
 A C G T A G T C G C T A A C T G A C G T C T A G A G T C A G T C A C G T A G T C C G A T A T C G A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TCAGTGCCTCTGTTCT--
------CCTTTGATCTTT
 A C G T A G T C G C T A A C T G A C G T C T A G A G T C A G T C A C G T A G T C C G A T A T C G A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T